Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1599 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTTCATCATCATCATCATCAGCTTCAACGCCCTAATCTTCAATCCAGTGAAGATGATGATAACCAAGACGATAGTACTAACCCTCTAGGGCTTAACCCGGCCGGTCCGGGCGATGTTGCCATTCGCCGGGCTAGGGGTAGGCCGCCGGGTTCGAAGAACAAGCCAAAGCCGCCGGTGATTATCACCCGCGAGAGCGCCAACGCGCTCCGAGCTCATATTCTTGAGGTTAGCAACGGCTCCGATGTGTTCGAGTGCGTGGCGACTTATGCTCGGCGGAGACAGCGAGGGATCTGTGTGTTGAGCGGGAGCGGCACCGTCACCAACGTGACAATCCGGCAGCCGGCAGCGGCTGGGGCTATTGCGACGCTTCAAGGGCGGTTTGAGATACTGTCTCTGTCCGGATCTTTCTTGCCGCCTCCAGCTCCGCCCGGAGCGACGAGCCTGAGCATATTTCTTGCCGGCGGGCAAGGTCAAGTGGTCGGAGGAAATGTTGTCGGCGCTTTGGTGGCAGCTGGGCCGATTATTGTGATTGCTTCTTCATTTACCAACGTAGCATATGAGAGATTGCCGTTGGATAACGAGGAGGAACCCTTACCGGTCCAGAACGGCGGCGATGGCAGTGGCGACCACGATGCTGACCGAGACATGAACGGATTTCCGAGCTCGTCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAATTACCACTTAACGGTAATTGGGTTGAAAATTCAGGTGGAAGATCGCAGCCATATTAA 810 0.5481 MAGLDLGSSQSHHFLHHHHHQLQRPNLQSSEDDDNQDDSTNPLGLNPAGPGDVAIRRARGRPPGSKNKPKPPVIITRESANALRAHILEVSNGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPAAAGAIATLQGRFEILSLSGSFLPPPAPPGATSLSIFLAGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGGDGSGDHDADRDMNGFPSSSSGLPFLNLPVNMSQLPLNGNWVENSGGRSQPY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1599 269 Gene3D - 83 214 - -
Prci13g1599 269 ProSiteProfiles PPC domain profile profile. 80 218 IPR005175 -
Prci13g1599 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 222 IPR014476 GO:0003680
Prci13g1599 269 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Prci13g1599 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Prci13g1599 269 PIRSF ESCAROLA 3 267 IPR014476 GO:0003680
Prci13g1599 269 MobiDBLite consensus disorder prediction 1 73 - -
Prci13g1599 269 MobiDBLite consensus disorder prediction 207 237 - -
Prci13g1599 269 CDD DUF296 84 167 IPR005175 -
Prci13g1599 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1599 Prci-Chr13 25300578 25301860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1599 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 60.396 5.68e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1599 - - gmx:100814613 345.895