Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1596 ATGAGAAGAGGTCTAACATTATACTCACCATGCATGTTGGAGCATGTAATGCTGCCAGTGGGAATTGGGTTTTTATCAATATGGTTGATCCAAGTGCTAAAGGAAGGTCTGGAACTAATCAGGAAGAAGAGAAACAAGGTCTCAGAGCAGGACAAAGAGATTCATCCCAATGTACTGAAGTATGGTTTGGCTTACAAAACCTGTATATTGTGCTGTGCTTTAATGCCTGCAGTTCATGTCTCGTTGCTTCTGGTGATGGTCAAAGGTGAGACTCAGTGCAACTCAAAACCTGTGGCTTTTACGTCAGAGACATTTCTGGTATTAGCATGGGCAATCACATTGATATCAGTGTTTAAGATGCCAAAATTCAATGTTAAGTTCCCTTGGATGCTAAGATCATGGTGGGTTTGCAGCTTCTTTTTGTGTATCATCAACTTAGTCTTTCATAGCCATTTTATCAGCAAACAGAAACAGATTGGGTTGAGGGAATATGCAGATTTGGTTGGTCTGCTTGCTTCAACAGTTCTACTAGGGATTGCAATAAGGGGAAGAACGGGGATTGTGTTGATTGCTACAGACGGCATCTCTGAGCCACTTTTGAGTGAGAAAAGTGGCAAGGATTCAGAATCATCCAAAAGGGAATCTTTATATGGGAAATCCACTTTCATTCAACTTATTACCTTCTCATGGCTTAATCCCTTGTTTGCAGTAGGGTATAAGAAAGCCCTTGAACAAAGTGACATTCCTGAGGTTGCTATTGAGGATTCTGCAGAATTTCTGTCTTCATCCTTTGATGAGAGCCTTAGAAAAGTCAAGGAGGCTGATGGGACCACAAATCCATCTGTCTACAAGGCAATTTATCTATTTGCTAGTAAGAAGACTCTGATCAATGCATGCTTTGCAGTAGCAAGTGCTGCAGCATCATATGTTGGCCCATACCTGATCACTGACTTCGTGAGTTTCCTAGCAGAGAAGGGAAGCCGTGGGTTGAATGAAGGATTCTTGTTGTCATTTGGATTCTTATGCGCCAAGATGATTGAGACAATAACTCAGAGGCAATGGATTTTCGGTGCTCGCCAAGCAGGTCTTCGCCTTAGAGTGGCATTGATATCACACATATACAAGAAGGGCTTAAATCTGTCCAGCAGATCGCGCCAGAGTCACAGCGGTGGTGAGATTATGAACTATATGAGTGTAGATGTGCAGAGAATAACAGATTTCATGTATTACATCAATGTCATATGGATGCTTCCCGTGCAAATTACCTTGGCAGTCTATATTTTGCACATGAATCTTGGTTTGGGTTCATTGGCTGCACTAGCTGCTACTCTGACGGTTATGGGCTTCAACATACCTCTTACAAGAATACAGAAAAGATACCAAGCTAAGATCATGGAGGCTAAGGATAGTAGGATGAAAGCCACATCAGAAGTCCTTAGAAACATAAAGACTTTGAAACTTCAAGCTTGGGATACTGAATTTCAGCACAGGTTAGAAGAACTGAGGGAAACAGAATCCATCTGGTTATGGAAGTCATTAAGACAAGGAGCATACTCTGCTTTTATCTTCTGGGGATCACCCACATTTATTTCTTTGGTAACCTTCTGGGTTTGTATCTTGATGGGGATTGAACTAACAGCTGGGAGAGTTTTATCTGCATTCGCCACATTTCGGATGTTACAGGATCCTATATTTAACTTACCAGATTTACTCAATGTCATTGCTCAAGGGAAAGTTTCAGTGGATAGAATTGCTTCTTATCTTAGGGAAGAAGAAGTTCAACATGACGCCATTGAGTATGTGCCAGGGGACCAAACAGAGTTTGATATAGTTATTGAAAATGGAAGATTCAGCTGGGATTCTGAGACAAGCAATCCAACCCTTGATGGAATAGATTTAAGAGTCAAAAGAGGAATGAAGGTGGCAATTTGTGGGACTGTAGGTTCTGGAAAGTCTAGTCTGCTTTCTGGCATTTTGGGTGAATTGTATAAGCAGTCTGGGACTGTGAAGATCAGTGGAACAAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAATTTTAGGGACAATATTACCTTCGGAAAGGAATTCAATAGTGTCAAGTATGAGAAGACTATTGAAGCATGTGCATTGATAAAGGACTATGAGCTATTCTCCTGCGGAGACCTCACACAGATTGGAGAAAGAGGGATCAATATGAGCGGAGGACAGAAGCAAAGGATTCAAATTGCTCGTTCAGTTTATCAAGATGCTGATATATATCTTTTTGATGACCCTTTTAGTGCTGTTGATGCTCATACTGGAAGCCACCTCTTTAAAGAGTGCCTTATGGGGGTTCTCAGAGAAAAAACTATACTTTATGTTACCCACCAAGTTGAATTTCTTCCAGCAGCAGACCTTATTCTGGTGATGCAGAATGGAAGGATTGCACAATCTGGAACCTTTGAAGAACTTCTAAAGCAAAATATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTAGAGTCAATTCTCACGGTTGAGAATTCAAGCAGAGCATCCCAAAACCCCACACCTGAAGTTGAACCTAACATCAATTCTCAGTCAAATGCAGAACTTGCTCAAATTCAACATAACACAGAGCAAGGAAGTCCCCCAGAGATCAAAGAAAAGGAAGGACAACTTATTCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAGAGAAGTTTACTGGACCTACTTGACCACTGTCAAAGGAGGTGCCCTTGTTCCATTCATTCTTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCCAGTAACTATTGGATGGCTTGGGTTTGCCCTACATCAAGTGATGCTAAGCCTACATTTGACATGGATTTCATACTACTTGTTTATATGGCACTTTCAGTTGGTAGTTCATTTTGTGTGCTCATAAGAGCCATACTAGTGGCAAAAGCTGGACTTTGGACTGCACAGAAACTATTCATCAACATGTTGCATAGTGTAGTTCGAGCACCAATGTCATTTTTTGATTCAACTCCAAATGGCAGAATTTTGAACAGGACTTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCGACCAAATTGGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACAATTGCAGTAATGTCACAGGTGGCATGGCAAGTGTTTGTCATCTTTATTCCAGTAACCGCAGTCTGCATATGGTATCAAAGATACTATACACCAACAGCAAGAGAGCTGGCTCGCTTATCACAAATACAAATAGCTCCAATTCTGCATCATTTTGCAGAATCCTTAGCAGGAGCGGCATCAATTCGAGCTTTCGATCAGGAAGGCCGTTTTGTATATTCAAATCTTGAGCTCGTTGACAACTATTCAAAACCGTGGTTCCATAACGTTTCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTCTTTGCCTTCTCACTGGTTTTGCTCGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAACTTGAATGTCCTACAGGCTTCAGTCATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATATCAACAGTGAAGCAGCTCTTGTGATTGAAGATTCTAGGCCATCAAACAACTGGCCTGAAACTGGAACAATATGTTTCAAAAACTTGCAGATACGTTATGCTGAACATCTACCATCTGTTTTGAAAAACATCGATTGCACATTCCCTGGAAGGAAGAAGATTGGTGTTGTGGGACGAACTGGGAGTGGAAAATCAACCTTAATACAAGCCATTTTCAGGATTGTTGAACCTTGGGAAGGAAGCATTATAATTGATGATTTGGATATATGCAAGATTGGTCTACATGACTTAAGGTTGAGGCTTAGCATCATTCCACAGGATCCCACAATGTTTGAAGGCACAGTTAGAGGAAACTTGGACCCACTTGAGCAATACTCTGACAAAGAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAGGCGTCAGTGGTTGAAAATGGAGAGAACTGGAGCGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGAGCCTTACTGAAGAAGAGTAGTGTACTTGTGCTTGATGAAGCAACTGCATCAGTTGATTCTGCAACTGATGGAGTGATACAGAAGATCATCAGTCAAGAATTCAAAGACAGAACTGTTGTCACAATAGCCCATAGAATTCATACTGTTATTGACAGTGATTTGGTTTTGGTCCTGAGTGATGGGAAAATTGCAGAGTTCGATGCACCGTCGAAGTTACTTGAAAGAGAAGATTCCTTCTTCTCTAAACTCATAAGGGAGTACTCAAGAAGATCTCAGAGTTTCAACAGCTTGGCCACTCAAAATGGCCAATAA 4479 0.4104 MRRGLTLYSPCMLEHVMLPVGIGFLSIWLIQVLKEGLELIRKKRNKVSEQDKEIHPNVLKYGLAYKTCILCCALMPAVHVSLLLVMVKGETQCNSKPVAFTSETFLVLAWAITLISVFKMPKFNVKFPWMLRSWWVCSFFLCIINLVFHSHFISKQKQIGLREYADLVGLLASTVLLGIAIRGRTGIVLIATDGISEPLLSEKSGKDSESSKRESLYGKSTFIQLITFSWLNPLFAVGYKKALEQSDIPEVAIEDSAEFLSSSFDESLRKVKEADGTTNPSVYKAIYLFASKKTLINACFAVASAAASYVGPYLITDFVSFLAEKGSRGLNEGFLLSFGFLCAKMIETITQRQWIFGARQAGLRLRVALISHIYKKGLNLSSRSRQSHSGGEIMNYMSVDVQRITDFMYYINVIWMLPVQITLAVYILHMNLGLGSLAALAATLTVMGFNIPLTRIQKRYQAKIMEAKDSRMKATSEVLRNIKTLKLQAWDTEFQHRLEELRETESIWLWKSLRQGAYSAFIFWGSPTFISLVTFWVCILMGIELTAGRVLSAFATFRMLQDPIFNLPDLLNVIAQGKVSVDRIASYLREEEVQHDAIEYVPGDQTEFDIVIENGRFSWDSETSNPTLDGIDLRVKRGMKVAICGTVGSGKSSLLSGILGELYKQSGTVKISGTKAYVPQSPWILTGNFRDNITFGKEFNSVKYEKTIEACALIKDYELFSCGDLTQIGERGINMSGGQKQRIQIARSVYQDADIYLFDDPFSAVDAHTGSHLFKECLMGVLREKTILYVTHQVEFLPAADLILVMQNGRIAQSGTFEELLKQNIGFEVLVGAHSQALESILTVENSSRASQNPTPEVEPNINSQSNAELAQIQHNTEQGSPPEIKEKEGQLIQDEERERGSISREVYWTYLTTVKGGALVPFILLAQSSFQVLQVASNYWMAWVCPTSSDAKPTFDMDFILLVYMALSVGSSFCVLIRAILVAKAGLWTAQKLFINMLHSVVRAPMSFFDSTPNGRILNRTSTDQSVLDLEMATKLGWCAFSIIQILGTIAVMSQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLSQIQIAPILHHFAESLAGAASIRAFDQEGRFVYSNLELVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERIIQYSNINSEAALVIEDSRPSNNWPETGTICFKNLQIRYAEHLPSVLKNIDCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPWEGSIIIDDLDICKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKEVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSVLVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGKIAEFDAPSKLLEREDSFFSKLIREYSRRSQSFNSLATQNGQ 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1596 1492 FunFam ABC transporter C family member 5 884 1221 - -
Prci13g1596 1492 ProSitePatterns ABC transporters family signature. 735 749 IPR017871 GO:0005524|GO:0016887
Prci13g1596 1492 SMART AAA_5 1266 1458 IPR003593 GO:0016887
Prci13g1596 1492 SMART AAA_5 637 810 IPR003593 GO:0016887
Prci13g1596 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 833 IPR003439 GO:0005524
Prci13g1596 1492 CDD ABCC_MRP_domain1 610 810 - -
Prci13g1596 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1474 IPR003439 GO:0005524
Prci13g1596 1492 Gene3D ABC transporter type 1, transmembrane domain 270 596 IPR036640 GO:0005524|GO:0016020
Prci13g1596 1492 Gene3D ABC transporter type 1, transmembrane domain 884 1221 IPR036640 GO:0005524|GO:0016020
Prci13g1596 1492 CDD ABCC_MRP_domain2 1238 1458 - -
Prci13g1596 1492 FunFam ABC transporter C family member 3 1223 1475 - -
Prci13g1596 1492 SUPERFAMILY ABC transporter transmembrane region 923 1215 IPR036640 GO:0005524|GO:0016020
Prci13g1596 1492 FunFam ABC transporter C family member 5 595 842 - -
Prci13g1596 1492 Gene3D - 608 839 IPR027417 -
Prci13g1596 1492 CDD ABC_6TM_ABCC_D1 308 584 IPR044746 GO:0140359
Prci13g1596 1492 Gene3D - 1223 1476 IPR027417 -
Prci13g1596 1492 MobiDBLite consensus disorder prediction 881 896 - -
Prci13g1596 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1596 1492 CDD ABC_6TM_ABCC_D2 921 1215 IPR044726 GO:0140359
Prci13g1596 1492 Pfam ABC transporter transmembrane region 295 559 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1596 1492 Pfam ABC transporter transmembrane region 932 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1596 1492 Pfam ABC transporter 628 762 IPR003439 GO:0005524
Prci13g1596 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 219 1477 - -
Prci13g1596 1492 MobiDBLite consensus disorder prediction 874 896 - -
Prci13g1596 1492 FunFam ABC transporter C family member 10 278 592 - -
Prci13g1596 1492 SUPERFAMILY ABC transporter transmembrane region 294 592 IPR036640 GO:0005524|GO:0016020
Prci13g1596 1492 Pfam ABC transporter 1257 1405 IPR003439 GO:0005524
Prci13g1596 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 826 IPR027417 -
Prci13g1596 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1470 IPR027417 -
Prci13g1596 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1596 Prci-Chr13 25052639 25060204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1596 610 855 Calmodulin-binding Proteins AT2G36910 29.699 5.99e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1596 - - gmx:100809749 2265.34