Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1595 ATGCTTTGGGGGAACATTTCCAACAAGGTTTTAAGTGCTTCAAGTCTAACATTATACTCACCATGCATGTTGGAGCATGTAATGCTGCCAGTGGGAATTGGGTTTTTATCAATATGGTTGATCCAAGTGCTAAAGGAAGGTCTGGAACTAATCAGGAAGAAGAGAAACAAGGTCTCAGAGCAGGACAAAGAGATTCATCCCAATGTACTGAAGTATGGTTTGGCTTACAAAACCTGTATATTGTGCTGTGCTTTAATGCCTGCAGTTCATGTCTCGTTGCTTCTGGTGATGGTCAAAGGTGAGACTCAGTGCAACTCAAAACCTGTGGCTTTTACGTCAGAGACATTTCTGGTATTAGCATGGGCAATCACATTGATATCAGTGTTTAAGATGCCAAAATTCAATGTTAAGTTCCCTTGGATGCTAAGATCATGGTGGGTTTGCAGCTTCTTTTTGTGTATCATCAACTTAGTCTTTCATAGCCATTTTATCAGCAAACAGAAACAGATTGGGTTGAGGGAATATGCAGATTTGGTTGGTCTGCTTGCTTCAACAGTTCTACTAGGGATTGCAATAAGGGGAAGAACGGGGATTGTGTTGATTGCTACAGACGGCATCTCTGAGCCACTTTTGAGTGAGAAAAGTGGCAAGGATTCAGAATCATCCAAAAGGGAATCTTTATATGGGAAATCCACTTTCATTCAACTTATTACCTTCTCATGGCTTAATCCCTTGTTTGCAGTAGGGTATAAGAAAGCCCTTGAACAAAGTGACATTCCTGAGGTTGCTATTGAGGATTCTGCAGAATTTCTGTCTTCATCCTTTGATGAGAGCCTTAGAAAAGTCAAGGAGGCTGATGGGACCACAAATCCATCTGTCTACAAGGCAATTTATCTATTTGCTAGTAAGAAGACTCTGATCAATGCATGCTTTGCAGTAGCAAGTGCTGCAGCATCATATGTTGGCCCATACCTGATCACTGACTTCGTGAGTTTCCTAGCAGAGAAGGGAAGCCGTGGGTTGAATGAAGGATTCTTGTTGTCATTTGGATTCTTATGCGCCAAGATGATTGAGACAATAACTCAGAGGCAATGGATTTTCGGTGCTCGCCAAGCAGGTCTTCGCCTTAGAGTGGCATTGATATCACACATATACAAGAAGGGCTTAAATCTGTCCAGCAGATCGCGCCAGAGTCACAGCGGTGGTGAGATTATGAACTATATGAGTGTAGATGTGCAGAGAATAACAGATTTCATGTATTACATCAATGTCATATGGATGCTTCCCGTGCAAATTACCTTGGCAGTCTATATTTTGCACATGAATCTTGGTTTGGGTTCATTGGCTGCACTAGCTGCTACTCTGACGGTTATGGGCTTCAACATACCTCTTACAAGAATACAGAAAAGATACCAAGCTAAGATCATGGAGGCTAAGGATAGTAGGATGAAAGCCACATCAGAAGTCCTTAGAAACATAAAGACTTTGAAACTTCAAGCTTGGGATACTGAATTTCAGCACAGGTTAGAAGAACTGAGGGAAACAGAATCCATCTGGTTATGGAAGTCATTAAGACAAGGAGCATACTCTGCTTTTATCTTCTGGGGATCACCCACATTTATTTCTTTGGTAACCTTCTGGGTTTGTATCTTGATGGGGATTGAACTAACAGCTGGGAGAGTTTTATCTGCATTCGCCACATTTCGGATGTTACAGGATCCTATATTTAACTTACCAGATTTACTCAATGTCATTGCTCAAGGGAAAGTTTCAGTGGATAGAATTGCTTCTTATCTTAGGGAAGAAGAAGTTCAACATGACGCCATTGAGTATGTGCCAGGGGACCAAACAGAGTTTGATATAGTTATTGAAAATGGAAGATTCAGCTGGGATTCTGAGACAAGCAATCCAACCCTTGATGGAATAGATTTAAGAGTCAAAAGAGGAATGAAGGTGGCAATTTGTGGGACTGTAGGTTCTGGAAAGTCTAGTCTGCTTTCTGGCATTTTGGGTGAATTGTATAAGCAGTCTGGGACTGTGAAGATCAGTGGAACAAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAATTTTAGGGACAATATTACCTTCGGAAAGGAATTCAATAGTGTCAAGTATGAGAAGACTATTGAAGCATGTGCATTGATAAAGGACTATGAGCTATTCTCCTGCGGAGACCTCACACAGATTGGAGAAAGAGGGATCAATATGAGCGGAGGACAGAAGCAAAGGATTCAAATTGCTCGTTCAGTTTATCAAGATGCTGATATATATCTTTTTGATGACCCTTTTAGTGCTGTTGATGCTCATACTGGAAGCCACCTCTTTAAAGAGTGCCTTATGGGGGTTCTCAGAGAAAAAACTATACTTTATGTTACCCACCAAGTTGAATTTCTTCCAGCAGCAGACCTTATTCTGGTGATGCAGAATGGAAGGATTGCACAATCTGGAACCTTTGAAGAACTTCTAAAGCAAAATATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTAGAGTCAATTCTCACGGTTGAGAATTCAAGCAGAGCATCCCAAAACCCCACACCTGAAGTTGAACCTAACATCAATTCTCAGTCAAATGCAGAACTTGCTCAAATTCAACATAACACAGAGCAAGGAAGTCCCCCAGAGATCAAAGAAAAGGAAGGACAACTTATTCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAGAGAAGTTTACTGGACCTACTTGACCACTGTCAAAGGAGGTGCCCTTGTTCCATTCATTCTTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCCAGTAACTATTGGATGGCTTGGGTTTGCCCTACATCAAGTGATGCTAAGCCTACATTTGACATGGATTTCATACTACTTGTTTATATGGCACTTTCAGTTGGTAGTTCATTTTGTGTGCTCATAAGAGCCATACTAGTGGCAAAAGCTGGACTTTGGACTGCACAGAAACTATTCATCAACATGTTGCATAGTGTAGTTCGAGCACCAATGTCATTTTTTGATTCAACTCCAAATGGCAGAATTTTGAACAGGACTTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCGACCAAATTGGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACAATTGCAGTAATGTCACAGGTGGCATGGCAAGTGTTTGTCATCTTTATTCCAGTAACCGCAGTCTGCATATGGTATCAAAGATACTATACACCAACAGCAAGAGAGCTGGCTCGCTTATCACAAATACAAATAGCTCCAATTCTGCATCATTTTGCAGAATCCTTAGCAGGAGCGGCATCAATTCGAGCTTTCGATCAGGAAGGCCGTTTTGTATATTCAAATCTTGAGCTCGTTGACAACTATTCAAAACCGTGGTTCCATAACGTTTCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTCTTTGCCTTCTCACTGGTTTTGCTCGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAACTTGAATGTCCTACAGGCTTCAGTCATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATATCAACAGTGAAGCAGCTCTTGTGATTGAAGATTCTAGGCCATCAAACAACTGGCCTGAAACTGGAACAATATGTTTCAAAAACTTGCAGATACGTTATGCTGAACATCTACCATCTGTTTTGAAAAACATCGATTGCACATTCCCTGGAAGGAAGAAGATTGGTGTTGTGGGACGAACTGGGAGTGGAAAATCAACCTTAATACAAGCCATTTTCAGGATTGTTGAACCTTGGGAAGGAAGCATTATAATTGATGATTTGGATATATGCAAGATTGGTCTACATGACTTAAGGTTGAGGCTTAGCATCATTCCACAGGATCCCACAATGTTTGAAGGCACAGTTAGAGGAAACTTGGACCCACTTGAGCAATACTCTGACAAAGAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAGGCGTCAGTGGTTGAAAATGGAGAGAACTGGAGCGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGAGCCTTACTGAAGAAGAGTAGTGTACTTGTGCTTGATGAAGCAACTGCATCAGTTGATTCTGCAACTGATGGAGTGATACAGAAGATCATCAGTCAAGAATTCAAAGACAGAACTGTTGTCACAATAGCCCATAGAATTCATACTGTTATTGACAGTGATTTGGTTTTGGTCCTGAGTGATGGGAAAATTGCAGAGTTCGATGCACCGTCGAAGTTACTTGAAAGAGAAGATTCCTTCTTCTCTAAACTCATAAGGGAGTACTCAAGAAGATCTCAGAGTTTCAACAGCTTGGCCACTCAAAATGGCCAATAA 4512 0.4102 MLWGNISNKVLSASSLTLYSPCMLEHVMLPVGIGFLSIWLIQVLKEGLELIRKKRNKVSEQDKEIHPNVLKYGLAYKTCILCCALMPAVHVSLLLVMVKGETQCNSKPVAFTSETFLVLAWAITLISVFKMPKFNVKFPWMLRSWWVCSFFLCIINLVFHSHFISKQKQIGLREYADLVGLLASTVLLGIAIRGRTGIVLIATDGISEPLLSEKSGKDSESSKRESLYGKSTFIQLITFSWLNPLFAVGYKKALEQSDIPEVAIEDSAEFLSSSFDESLRKVKEADGTTNPSVYKAIYLFASKKTLINACFAVASAAASYVGPYLITDFVSFLAEKGSRGLNEGFLLSFGFLCAKMIETITQRQWIFGARQAGLRLRVALISHIYKKGLNLSSRSRQSHSGGEIMNYMSVDVQRITDFMYYINVIWMLPVQITLAVYILHMNLGLGSLAALAATLTVMGFNIPLTRIQKRYQAKIMEAKDSRMKATSEVLRNIKTLKLQAWDTEFQHRLEELRETESIWLWKSLRQGAYSAFIFWGSPTFISLVTFWVCILMGIELTAGRVLSAFATFRMLQDPIFNLPDLLNVIAQGKVSVDRIASYLREEEVQHDAIEYVPGDQTEFDIVIENGRFSWDSETSNPTLDGIDLRVKRGMKVAICGTVGSGKSSLLSGILGELYKQSGTVKISGTKAYVPQSPWILTGNFRDNITFGKEFNSVKYEKTIEACALIKDYELFSCGDLTQIGERGINMSGGQKQRIQIARSVYQDADIYLFDDPFSAVDAHTGSHLFKECLMGVLREKTILYVTHQVEFLPAADLILVMQNGRIAQSGTFEELLKQNIGFEVLVGAHSQALESILTVENSSRASQNPTPEVEPNINSQSNAELAQIQHNTEQGSPPEIKEKEGQLIQDEERERGSISREVYWTYLTTVKGGALVPFILLAQSSFQVLQVASNYWMAWVCPTSSDAKPTFDMDFILLVYMALSVGSSFCVLIRAILVAKAGLWTAQKLFINMLHSVVRAPMSFFDSTPNGRILNRTSTDQSVLDLEMATKLGWCAFSIIQILGTIAVMSQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLSQIQIAPILHHFAESLAGAASIRAFDQEGRFVYSNLELVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERIIQYSNINSEAALVIEDSRPSNNWPETGTICFKNLQIRYAEHLPSVLKNIDCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPWEGSIIIDDLDICKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKEVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSVLVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGKIAEFDAPSKLLEREDSFFSKLIREYSRRSQSFNSLATQNGQ 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1595 1503 Pfam ABC transporter transmembrane region 943 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1595 1503 Pfam ABC transporter transmembrane region 306 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1595 1503 CDD ABC_6TM_ABCC_D1 319 595 IPR044746 GO:0140359
Prci13g1595 1503 MobiDBLite consensus disorder prediction 892 907 - -
Prci13g1595 1503 CDD ABCC_MRP_domain2 1249 1469 - -
Prci13g1595 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 837 IPR027417 -
Prci13g1595 1503 FunFam ABC transporter C family member 5 895 1232 - -
Prci13g1595 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 621 844 IPR003439 GO:0005524
Prci13g1595 1503 MobiDBLite consensus disorder prediction 885 907 - -
Prci13g1595 1503 Pfam ABC transporter 639 773 IPR003439 GO:0005524
Prci13g1595 1503 FunFam ABC transporter C family member 5 606 853 - -
Prci13g1595 1503 Pfam ABC transporter 1268 1416 IPR003439 GO:0005524
Prci13g1595 1503 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016020
Prci13g1595 1503 CDD ABCC_MRP_domain1 621 821 - -
Prci13g1595 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1595 1503 SUPERFAMILY ABC transporter transmembrane region 305 603 IPR036640 GO:0005524|GO:0016020
Prci13g1595 1503 Gene3D - 1234 1487 IPR027417 -
Prci13g1595 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1214 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1595 1503 SUPERFAMILY ABC transporter transmembrane region 934 1226 IPR036640 GO:0005524|GO:0016020
Prci13g1595 1503 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524|GO:0016887
Prci13g1595 1503 FunFam ABC transporter C family member 3 1234 1486 - -
Prci13g1595 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1485 IPR003439 GO:0005524
Prci13g1595 1503 FunFam ABC transporter C family member 10 289 603 - -
Prci13g1595 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 230 1488 - -
Prci13g1595 1503 SMART AAA_5 1277 1469 IPR003593 GO:0016887
Prci13g1595 1503 SMART AAA_5 648 821 IPR003593 GO:0016887
Prci13g1595 1503 Gene3D ABC transporter type 1, transmembrane domain 895 1232 IPR036640 GO:0005524|GO:0016020
Prci13g1595 1503 Gene3D - 619 850 IPR027417 -
Prci13g1595 1503 CDD ABC_6TM_ABCC_D2 932 1226 IPR044726 GO:0140359
Prci13g1595 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1481 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1595 Prci-Chr13 25052639 25062509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1595 621 866 Calmodulin-binding Proteins AT2G36910 29.699 5.95e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1595 - - gmx:100809749 2265.34