Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1579 ATGGCCTCCTCCTTCCTTACCTTACCAAAACCTTTTCTTTGCCCTGCTACTTCTTCCTTCTCTTCGTCTAATCGCAGACTTACAGGTTTACGGAAGAACTCATTGAAGGTTGATGCAACTGTGAAGAAATGGGAACCCACAAAGGTGGTTCCTCAGGCTGATAGAGTTCTTATTCGTTTGGATGAGCCTGAACAAAAAACTAGGGGTGGAGTATTGCTGCCAAAGTCAGCTGTTAAGTTTGAGCGATATCTAATGGGAGAAGTTCTTTCTGTTGGGGCAGAGGTTCAAGAAGTAGGGGCTGGCAAGAAGGTATTATTCTCTGACGTAAATGCTTATGAGGTGGATTTGGGAACTGATGCAAAGCTTTGCTTCTGTAAAGAAAGTGATTTATTGGCCGTGGTTGAGTAG 408 0.4387 MASSFLTLPKPFLCPATSSFSSSNRRLTGLRKNSLKVDATVKKWEPTKVVPQADRVLIRLDEPEQKTRGGVLLPKSAVKFERYLMGEVLSVGAEVQEVGAGKKVLFSDVNAYEVDLGTDAKLCFCKESDLLAVVE 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1579 135 Pfam Chaperonin 10 Kd subunit 48 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 PANTHER 10 KDA HEAT SHOCK PROTEIN 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 PRINTS 10kDa chaperonin signature 99 111 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 PRINTS 10kDa chaperonin signature 121 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 PRINTS 10kDa chaperonin signature 49 64 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 PRINTS 10kDa chaperonin signature 73 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 FunFam 10 kDa chaperonin 44 135 - -
Prci13g1579 135 SMART Cpn10_2 48 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 SUPERFAMILY GroES-like 48 135 IPR011032 -
Prci13g1579 135 CDD cpn10 48 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Prci13g1579 135 Gene3D GroES chaperonin 44 135 IPR037124 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1579 Prci-Chr13 24559533 24563837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1579 18 135 Calmodulin-binding Proteins AT5G20720 31.496 1.28e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1579 K04078 - jre:109017055 201.06