Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1578 ATGGCGAATCGTGACGTGTTGATGAACGGAAAAGGCTCAATACTTACCCTGCGTAGCAGTGGAAATCTAGTGCTGAATGATGCACTTACCCTGCGTAGCAGTGGAAATCTAGTGCTGAATGATGCAGATCATGTCGATGTTTGGGCCACGAACACGACGTCGTCGAGGTCTCCACAGTTGATTCTTAAAGATAATGGCAATCTTGTTCTTCTTGAACACCCTAATCATGTTCTGTGGCAAAGTTTTGATTTTCCGACGGACACGCTCGTTCCCGAGCAGAGGCTTACCAGACGCTCTAGCCTTGCCTCCTCCAAAAGTCAGACTAACTCCTCTTCTGGTTTCTATAACTTACATTTTGACGATTATAATATTCTTCGTCTTGTCTACGATGGTCCCAATCTATCGACTATTTATTGGCCATCTCCTTGGAAAAACCCATGGCAAGCTGGTGGATCTCCTTACAACGAAAGTCGCATTGCGTTTCTCGATACGCATGGTGCTTTCATTTCAACTGATAACTTTACTTGCAGGACATCAGACTATGGTCCTGTACTTCAGAGACGATTAACCATTGATAGTGATGGTAATATCAGGATCTACAGTCGAAGAAACTGGACAGAGCAATGGTATGTTTCATGGCAAGCTTTTTCTGCAGGTTGCAAGGTTCATGGCATTTGTGGAGAAAATAGTGTCTGCAACTATGAACCATATTTTGGTCGAACATGCTTATGTCTTCCTGGTTACAAGTTCAAGAATGAAAGCGACGAGTCACTTGGGTGCGAACCAGAGTTCAATTTGTCTTGCAACCCAGAAGATCCTCGCTTTGTGTATATGCCTAATGGCGATTTCTATGGGCACGACCAAGGGGATTACCGTAACATCACGTTTAAGGAATGTAAGAATCAATGTTTGAAGTCTTGTGGCTGCAAAGGTTTCCAATATACACATGATCGTGATTGTTACCCAAAGTTCCTTTTGGTCAATGGCAATCTTTCCCCTGCTTTCAAGGGAGGAAAGCACATACTGTTGTTGGTGTATGAGTACATGGAAAATGGTTCTTTAGCGGAAAACCTCAAATCCAACAAGTTACTTGATTGGAGAAAGAGGTATGAAATCGCTCTCGGAACAGCAAGAGGACTGGCATATCTTCATGAAGAGTGCTCGGAGTGGGTTCTGCATTGCGATATAAAACCTCAAAACATACTTCTCGATTCAGATTATAGGCCCAAGGTTGCAGATCTTGGACTTTCAAAGCTTCAAAACAGAAATGACATCAACAATCTAAGCTTCTCAAGGATCAGAGGAAAAAGAGAATATATGGCACCAGAGTGGGTTTTCAACTTGCCAATAACTTCCAAGGTTGATGTTTATAGCTATGGAATCGTGTTGTTGGAGATGATAACAGGAAAAAGCTTGATGGTTGATGGACCGGATCACTCACTTGATGGGAGGCTAGTGACATGGGTGAGAGAGAAGAAGAAGAACGAAAGACAAGAAAACAAGACATCATCATCATCATGGGTGGAACAAATCATTGATCCGACAGTTGAAGGAAGTTATGAGATGAAGTCAATGGAGATTCTAGTGACAATGGCATTAGATTGTGTTGTGGAAGACGCAGATGCAAGACCTACAATGAGCCATGTTGTGAAGATGATTCAAGGCGTATCAGTTTGA 1677 0.4264 MANRDVLMNGKGSILTLRSSGNLVLNDALTLRSSGNLVLNDADHVDVWATNTTSSRSPQLILKDNGNLVLLEHPNHVLWQSFDFPTDTLVPEQRLTRRSSLASSKSQTNSSSGFYNLHFDDYNILRLVYDGPNLSTIYWPSPWKNPWQAGGSPYNESRIAFLDTHGAFISTDNFTCRTSDYGPVLQRRLTIDSDGNIRIYSRRNWTEQWYVSWQAFSAGCKVHGICGENSVCNYEPYFGRTCLCLPGYKFKNESDESLGCEPEFNLSCNPEDPRFVYMPNGDFYGHDQGDYRNITFKECKNQCLKSCGCKGFQYTHDRDCYPKFLLVNGNLSPAFKGGKHILLLVYEYMENGSLAENLKSNKLLDWRKRYEIALGTARGLAYLHEECSEWVLHCDIKPQNILLDSDYRPKVADLGLSKLQNRNDINNLSFSRIRGKREYMAPEWVFNLPITSKVDVYSYGIVLLEMITGKSLMVDGPDHSLDGRLVTWVREKKKNERQENKTSSSSWVEQIIDPTVEGSYEMKSMEILVTMALDCVVEDADARPTMSHVVKMIQGVSV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1578 558 PANTHER OS07G0415500 PROTEIN 343 555 - -
Prci13g1578 558 Pfam Protein kinase domain 341 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1578 558 SMART ntp_6 270 346 IPR003609 -
Prci13g1578 558 Pfam S-locus glycoprotein domain 186 251 IPR000858 GO:0048544
Prci13g1578 558 ProSiteProfiles Bulb-type lectin domain profile. 1 83 IPR001480 -
Prci13g1578 558 ProSiteProfiles PAN/Apple domain profile. 268 346 IPR003609 -
Prci13g1578 558 Gene3D - 26 81 IPR036426 -
Prci13g1578 558 SUPERFAMILY alpha-D-mannose-specific plant lectins 28 100 IPR036426 -
Prci13g1578 558 SMART blect_4 4 85 IPR001480 -
Prci13g1578 558 SMART serkin_6 234 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1578 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Prci13g1578 558 Pfam D-mannose binding lectin 28 100 IPR001480 -
Prci13g1578 558 FunFam Putative receptor-like protein kinase 349 558 - -
Prci13g1578 558 ProSiteProfiles Protein kinase domain profile. 272 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1578 558 Gene3D Transferase(Phosphotransferase) domain 1 349 558 - -
Prci13g1578 558 SUPERFAMILY Protein kinase-like (PK-like) 340 553 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1578 Prci-Chr13 24529405 24531675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1578 339 553 Receptor kinase-like Gene Family AT1G29740 40.092 1.39e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci13g1578 Pkinase 6.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1578 - - pcin:129289960 1159.82