Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1545 ATGGCGTTTCTGAGTTTATCTTCCCTGCTGATATTCCTCCTCGTCGTGTCGGCTTTGCCTTTACTGTGTTTATCTTCTTCCTCGAATAATTTATTGTCTCTGTCGGTGGAAAATCCAGAACATGTGATCAAATCAAGAAACGGCAGTTTCACTGCTGGCTTCTATGACGTCGGTGAGAATGCTTTTGCTTTCGCTATCTGGTTCACTGAACCTCAAGGCCAAAACTTGACTGTGATTTGGATGGCGAATCGTGACGTACTGGTGAACGGAAAGGGCTCAACGCTTGCCCTCCGTAGCAATGGAAATCTGGTGTTGAACGATGCCGGTCAGGTTGATGTTTGGGCTACGAACACGACATCGTCTAAACCTCCACAATTGATTCTGAACGATGATGGTAATCTTGTTCTTCTTGAACCCCCTAATCATATTGTGTGGCAAAGTTTTGATTTTCCAACAGACACGCTAGTTCCCGGACAAAGGCTCACCAGACATGCTAGTCTTGTCTCCTCCAAAAGTCATACAAACCCATCCTCTGGTTTTCATAAGTTATTTTTTGACAATGATAATGTTCTTCGTCTTGTCTACGATGGCCCTGAGCTTTCGAGTATTTACTGGCCACCTCCCTGGTTTCAACCATGGCAAGTTGGTAGGTCCACCTTCAACGCAAGTCGCTTTATGTTTCTCGGTTTGTACGGTGATTTCATTTCAACTGATAACTTTACCAGCGAGACATCAGACTATGGCCTTGTGCTTCAGAGACGATTAACCATTGATAGTGATGGAAATGTCAGGGTCTATAGTCGAAGAAATTGGGAAGAGAAATGGTCTGTTTCATGGCAAGCTTTTTCTGCAGGTTGCAACATTCATGGAATCTGTGGAGAAAACAGTTTTTGTAAATATGAACCTTATTCTGGTCGAACATGCTTATGTCTTCCAGGTTACAGGTTCAAGGATGAAACCGATCCGTCACTTGGGTGTGAACCAGAGTTCAATTTGTCTTGCAATAACCCAGAAGATTCTCGCTTTCTTTATATACCTAATGGCGATTTCTACGGGTACGACCAAGGGACTTACCTTAACATTACATTTGATGAATGCAAGAATGAATGCTTGAAGTTATGTAATTGCAATGGCTTTCAATATACACATGACGGTGCACAATTTCTTTGCTACCCAAAGACCCTTTTGGTCAATGGCAATCTTTCCCCTGCTTTCAGAGGAGGTTTTCACTTGAGACTCCCTAATTCGAGCTCATTCACTCTTCAAGAACCCAACACCAAGTGTGATCTTGTTAAGTCTGTAAAGCTTGAGAGAGTCTATGTCTCAAGACAAGACAGTGTTTTAGTGAAGGTCTTATTGTGGTTAGCCATAGCAATTGGAGTCTTTGAACTTTCATGCGTCTTTCTCTTTTGGTGTCTTACGTGGAAAAATTATAGTGAGCAACAGAATTATGATCATCTTACTGGAACTGGGTTCAGAAAATATAGCTACTCAGAGTTGAAAGAAGCAACAAGAGGCTTTAATGAAGAGATTGGAAGAGGCGCCGGAGGAATCGTATACAAGGGTGTGTTAAAAGATGGACGAGTCGCTGCAATCAAGAGACTCAACGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCAGAAGTCAACTTAATTGGAAGACTTAACCACATGAACTTGATCGACATGTGGGGCTATTGTGCTGAAGGAAAGTACAGAATGTTGGTGTACGAGTACATGGAAAATGGTTCTTTAGCAGAAAACCTTGAATCCGACAAGATGTTACTTGATTGGAGAAAGAGGTATGATATCGCTCTAGGAACAGCAAGAGGTCTTGCGTATCTCCACGAAGAATGCTTGGAGTGGGTTCTGCATTGCGATATAAAACCTCAAAACATACTTCTGGATTCAGATTACAAACCCAAGGTTGCAGATTTTGGACTGTCAAAGCTGCAAAACAGGAACGACCTGAACAATCCAAGCTTCTCAAGGATCAGAGGAACAAGAGGATATATGGCACCAGAGTGGGTATTCAACTTACCAATAACATCCAAAGTTGATGTTTACAGCTATGGAATTGTGGTGTTGGAAATGATAACAGGAAAAAGCTTGAGGGTTGATGGACCAGATCACACACATCAGGGGAGGCTAGTGACATGGGTGAGGGAGAAGAAGAACAAAGGAGAAGGAAAGGCGTGGGTGGAACAAGTCATTGATCCGACAGTTGAGGGAAGCTTTGAGATGAAGACGATGGAGGTTTTGGTTACAGTAGCGTTGCAGTGTATAGTGGAAGATAAGGATGCAAGACCTTCAATGAGCCGTGTAGTGGAAATGCTTCAAAGTCATAGCATTGACCTTGTGTCTGAGTCTGAGTGA 2376 0.4263 MAFLSLSSLLIFLLVVSALPLLCLSSSSNNLLSLSVENPEHVIKSRNGSFTAGFYDVGENAFAFAIWFTEPQGQNLTVIWMANRDVLVNGKGSTLALRSNGNLVLNDAGQVDVWATNTTSSKPPQLILNDDGNLVLLEPPNHIVWQSFDFPTDTLVPGQRLTRHASLVSSKSHTNPSSGFHKLFFDNDNVLRLVYDGPELSSIYWPPPWFQPWQVGRSTFNASRFMFLGLYGDFISTDNFTSETSDYGLVLQRRLTIDSDGNVRVYSRRNWEEKWSVSWQAFSAGCNIHGICGENSFCKYEPYSGRTCLCLPGYRFKDETDPSLGCEPEFNLSCNNPEDSRFLYIPNGDFYGYDQGTYLNITFDECKNECLKLCNCNGFQYTHDGAQFLCYPKTLLVNGNLSPAFRGGFHLRLPNSSSFTLQEPNTKCDLVKSVKLERVYVSRQDSVLVKVLLWLAIAIGVFELSCVFLFWCLTWKNYSEQQNYDHLTGTGFRKYSYSELKEATRGFNEEIGRGAGGIVYKGVLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGSLAENLESDKMLLDWRKRYDIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVADFGLSKLQNRNDLNNPSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSLRVDGPDHTHQGRLVTWVREKKNKGEGKAWVEQVIDPTVEGSFEMKTMEVLVTVALQCIVEDKDARPSMSRVVEMLQSHSIDLVSESE 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1545 791 Pfam D-mannose binding lectin 77 165 IPR001480 -
Prci13g1545 791 Pfam Protein kinase domain 508 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1545 791 Gene3D - 26 150 IPR036426 -
Prci13g1545 791 Pfam S-locus glycoprotein domain 252 316 IPR000858 GO:0048544
Prci13g1545 791 ProSiteProfiles Protein kinase domain profile. 505 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1545 791 CDD B_lectin 45 151 IPR001480 -
Prci13g1545 791 Gene3D Transferase(Phosphotransferase) domain 1 580 789 - -
Prci13g1545 791 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Prci13g1545 791 FunFam Serine/threonine-protein kinase 580 786 - -
Prci13g1545 791 SMART blect_4 29 151 IPR001480 -
Prci13g1545 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Prci13g1545 791 ProSiteProfiles PAN/Apple domain profile. 334 416 IPR003609 -
Prci13g1545 791 CDD PAN_AP_plant 330 414 - -
Prci13g1545 791 SMART serkin_6 505 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1545 791 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Prci13g1545 791 SUPERFAMILY Protein kinase-like (PK-like) 487 780 IPR011009 -
Prci13g1545 791 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Prci13g1545 791 PANTHER OS07G0415500 PROTEIN 5 781 - -
Prci13g1545 791 FunFam S-receptor-like serine/threonine-protein kinase 475 579 - -
Prci13g1545 791 PIRSF SRK 1 790 IPR024171 GO:0004674
Prci13g1545 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 206 IPR036426 -
Prci13g1545 791 CDD STKc_IRAK 511 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1545 Prci-Chr13 22766394 22768968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1545 453 780 Receptor kinase-like Gene Family AT5G45780 37.427 5.40e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci13g1545 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1545 - - gmx:100783758 926.391