Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1521 ATGTTGGTTATTGATGAGAGTAGTTACACCTGGTTCATAAACCTCCAGAAAAAGGATATCCCATCTCTGAGGTGGCATGTCTTTTTAGGCTCCTCTTCCTCAGATTTTATCAAGAAGTGGAATTTACTAACTCCAGAATTACTAAAGAAGCATCTCACAAAGCTTCCACCATTTCGTTATTCATGGGCTCCCGAAGGTGCTGTCATAATATGCTTCACCTCAGGAACGACGGGAAAACCGAAGGGAGTTACCCTAAGCCATGCAGCTCTGATTATACAATCTCTAGCAAAGATTGCCATTGTTGGGTACTGTGAGGATGATATCTATTTGCATACTGCTCCATTGTGCCATATTGGTGGATTGTCATCGGCAATGGCCATGCTAATGGTTGGCAGCTGCCATGTCTTGATGTCCAAGTTTGATGCCCAATCAGCTGTTGATGCCATAGAGCAATATACTGTCACATCTCTAATCACAGTCCCTGCAATAATGGCTGATATGGTTCTCGTAATTAGGGGCAAGGAGACCTGGAATGGTGGAGAATCTGTCAAGAAAATACTCAACGGGGGTGGGAGCCTCTCAAATGAGCTCATCATGTACTCCAGTATATTCTTCCCTAAAGCTAAGCTTATCTCAGCTTATGGGATGACTGAGACTTGCTCTTCACTGACATTCCTGACCCTCTACGACTCGACTTATGAAAAGATTGGTCAGTCTTTTCAGACGGCTGCGAATAGAAGATCTGATACTATGAAATACTCTCAAGGTGTTTGTGTTGGCAAGGTTGCTCCCCATGTCGAACTTAGTATATATTCAGATGCCTCTGGTCATGTTGGGAGAATTTTAACTAGAGGGCCACATGTAATGCTCCGATATTGGGATCAAACTCCAACATGCCCGTTAGATCCATCAAATGACGTCTGGCTTGACACAGGTGATATTGGATCAATTGATCACAACGGTAATTTGTGGCTCCTTGGACGAACAAATGGTCTGATCAAAAGTGGTGGAGAGAACATCTATCCTGAAGAGGTTGAAGAAATTCTACTGGAACATTCAGGAATTGCCGGTGTGGTAATTGTGGGAATTCCTGATGTTCGCTTGACCGAGATGGTAGTTGCTTGTATCCAAACAAGTAAAGATTGGCAATGGTCAGAGCAGTCTGTTTCAGAAGATCATCACTTATCACCAGGGAATCTTAGGCAATATTGTATGAAAAAGAATTTAAGCAGGTTTAAGATACCAAAAGTGTTTATTTTGTGGAGGAAACCTTTTCCACTCACTACTTCTGGAAAAATAAGGAGAGACCAACTTCGAAAGGAACTCATGTATCAACTACATTCTTTGCAAAGTAATATTTGA 1362 0.4214 MLVIDESSYTWFINLQKKDIPSLRWHVFLGSSSSDFIKKWNLLTPELLKKHLTKLPPFRYSWAPEGAVIICFTSGTTGKPKGVTLSHAALIIQSLAKIAIVGYCEDDIYLHTAPLCHIGGLSSAMAMLMVGSCHVLMSKFDAQSAVDAIEQYTVTSLITVPAIMADMVLVIRGKETWNGGESVKKILNGGGSLSNELIMYSSIFFPKAKLISAYGMTETCSSLTFLTLYDSTYEKIGQSFQTAANRRSDTMKYSQGVCVGKVAPHVELSIYSDASGHVGRILTRGPHVMLRYWDQTPTCPLDPSNDVWLDTGDIGSIDHNGNLWLLGRTNGLIKSGGENIYPEEVEEILLEHSGIAGVVIVGIPDVRLTEMVVACIQTSKDWQWSEQSVSEDHHLSPGNLRQYCMKKNLSRFKIPKVFILWRKPFPLTTSGKIRRDQLRKELMYQLHSLQSNI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1521 453 PANTHER ACYL-COA SYNTHETASE 19 443 - -
Prci13g1521 453 Pfam AMP-binding enzyme 61 335 IPR000873 -
Prci13g1521 453 Gene3D - 2 331 IPR042099 -
Prci13g1521 453 ProSitePatterns Putative AMP-binding domain signature. 70 81 IPR020845 -
Prci13g1521 453 Gene3D - 332 445 IPR045851 -
Prci13g1521 453 Pfam AMP-binding enzyme C-terminal domain 344 432 IPR025110 -
Prci13g1521 453 SUPERFAMILY Acetyl-CoA synthetase-like 18 444 - -
Prci13g1521 453 CDD AFD_class_I 70 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1521 Prci-Chr13 21403124 21411424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1521 70 448 Monolignol Biosynthesis Gene Families AT4G19010 28.173 5.91e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1521 K14760 - gmx:100809925 677.937