Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1519 ATGGGTAAGTACTCCGATGCTCATATTTGCCAATGTTTGAATCAACTGTTAACTTCCCGACGGAATCTTCCGGTTACAATTACCAATGGCCAGCCCAAAACTGGAGAACAGTTCGTGCATGAAGTAGTGTCCTTGGCGTACGGCCTTCGAGAAATTGGAGTTAAAGCAGGTGACGTTGTCGCCATCTCTGCTTACAACAGTGATTTGTATCTGGGGTGGTTATTAGCTATTGCATTTGTTGGAGGGATAGCTTCTCCCTTGAACTATCGATGGAGCATTAAAGAGGCAATATTAGCAATTACCTCAGTGAGACCGGTGATGTTGGTTATTGATGAGAGTAGTTACACCTGGTTCATAAACCTCCAGAAAAAGGATATCCCATCTCTGAGGTGGCATGTCTTTTTAGGCTCCTCTTCCTCAGATTTTATCAAGAAGTGGAATTTACTAACTCCAGAATTACTAAAGAAGCATCTCACAAAGCTTCCACCATTTCGTTATTCATGGGCTCCCGAAGGTGCTGTCATAATATGCTTCACCTCAGGAACGACGGGAAAACCGAAGGGAGTTACCCTAAGCCATGCAGCTCTGATTATACAATCTCTAGCAAAGATTGCCATTGTTGGGTACTGTGAGGATGATATCTATTTGCATACTGCTCCATTGTGCCATATTGGTGGATTGTCATCGGCAATGGCCATGCTAATGGTTGGCAGCTGCCATGTCTTGATGTCCAAGTTTGATGCCCAATCAGCTGTTGATGCCATAGAGCAATATACTGTCACATCTCTAATCACAGTCCCTGCAATAATGGCTGATATGGTTCTCGTAATTAGGGGCAAGGAGACCTGGAATGGTGGAGAATCTGTCAAGAAAATACTCAACGGGGGTGGGAGCCTCTCAAATGAGCTCATCATGTACTCCAGTATATTCTTCCCTAAAGCTAAGCTTATCTCAGCTTATGGGATGACTGAGACTTGCTCTTCACTGACATTCCTGACCCTCTACGACTCGACTTATGAAAAGATTGGTCAGTCTTTTCAGACGGCTGCGAATAGAAGATCTGATACTATGAAATACTCTCAAGGTGTTTGTGTTGGCAAGGTTGCTCCCCATGTCGAACTTAGTATATATTCAGATGCCTCTGGTCATGTTGGGAGAATTTTAACTAGAGGGCCACATGTAATGCTCCGATATTGGGATCAAACTCCAACATGCCCGTTAGATCCATCAAATGACGTCTGGCTTGACACAGGTGATATTGGATCAATTGATCACAACGGTAATTTGTGGCTCCTTGGACGAACAAATGGTCTGATCAAAAGTGGTGGAGAGAACATCTATCCTGAAGAGGTTGAAGAAATTCTACTGGAACATTCAGGAATTGCCGGTGTGGTAATTGTGGGAATTCCTGATGTTCGCTTGACCGAGATGGTAGTTGCTTGTATCCAAACAAGTAAAGATTGGCAATGGTCAGAGCAGTCTGTTTCAGAAGATCATCACTTATCACCAGGGAATCTTAGGCAATATTGTATGAAAAAGAATTTAAGCAGGTTTAAGATACCAAAAGTGTTTATTTTGTGGAGGAAACCTTTTCCACTCACTACTTCTGGAAAAATAAGGAGAGACCAACTTCGAAAGGAACTCATGTATCAACTACATTCTTTGCAAAGTAATATTTGA 1680 0.4268 MGKYSDAHICQCLNQLLTSRRNLPVTITNGQPKTGEQFVHEVVSLAYGLREIGVKAGDVVAISAYNSDLYLGWLLAIAFVGGIASPLNYRWSIKEAILAITSVRPVMLVIDESSYTWFINLQKKDIPSLRWHVFLGSSSSDFIKKWNLLTPELLKKHLTKLPPFRYSWAPEGAVIICFTSGTTGKPKGVTLSHAALIIQSLAKIAIVGYCEDDIYLHTAPLCHIGGLSSAMAMLMVGSCHVLMSKFDAQSAVDAIEQYTVTSLITVPAIMADMVLVIRGKETWNGGESVKKILNGGGSLSNELIMYSSIFFPKAKLISAYGMTETCSSLTFLTLYDSTYEKIGQSFQTAANRRSDTMKYSQGVCVGKVAPHVELSIYSDASGHVGRILTRGPHVMLRYWDQTPTCPLDPSNDVWLDTGDIGSIDHNGNLWLLGRTNGLIKSGGENIYPEEVEEILLEHSGIAGVVIVGIPDVRLTEMVVACIQTSKDWQWSEQSVSEDHHLSPGNLRQYCMKKNLSRFKIPKVFILWRKPFPLTTSGKIRRDQLRKELMYQLHSLQSNI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1519 559 Gene3D - 3 437 IPR042099 -
Prci13g1519 559 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
Prci13g1519 559 Pfam AMP-binding enzyme 24 441 IPR000873 -
Prci13g1519 559 PANTHER ACYL-COA SYNTHETASE 7 549 - -
Prci13g1519 559 Pfam AMP-binding enzyme C-terminal domain 450 538 IPR025110 -
Prci13g1519 559 CDD AFD_class_I 176 540 - -
Prci13g1519 559 Gene3D - 438 551 IPR045851 -
Prci13g1519 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1519 Prci-Chr13 21403121 21411424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1519 42 554 Monolignol Biosynthesis Gene Families AT4G19010 26.930 6.15e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1519 K14760 - gmx:100809925 810.061