Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1497 ATGAATTCTGCAACTTGGATCACTTCCCTCTCGTGTTCTTCCCCTGTAAAACGAGCCCCAGGAGTTACGTTCCTTTCAACTCTACCTCAATGGCTACAATTTTTCTTCCTCTCTCCATGTTTTCAGAGAGCCCTATGGTCCGCCATTGATGCTATGCTCATCCTCGTTCTCTTCGTGCTTGCCATCAAGAAGCTCTCTTCCAAATTCACCACTAATGGCGGCGATCCGACATCAGAACTTGACAAGCCTCTTATCAGACATAACAGTGCTTTCATCAGAACAACAATGTGGTTTAAGCTAACTCTAATTGTGACGGTTGCTTTGACTATATTGTATGCTGTTGCGAGTTTTCTGGCATTTGTAAGAGACGCTCAAGTCTCATGGAAGCTAGTTGATGGATCGTTTTGGATAGTTCAAGCTCTGACTCATGTGGTTCTCACGATCTTAATCATTCATGAAAAGAGATTTCAAGCTGTTTCTCACCCAATACCACTTCGAATCTTTTGGATTGCAAACTTCATTGTCACTTCTTTGTTCGTCGTTTCTGGGGTTGTACGTTTGGTCTCTGAGCATGAAGGTGGCTTTGAGTTTAAGAACGATGATACCGTTTGTTTCATTTCCTTTCCTCCATCACTTTTGCTTTTTCTTGTTGCCATTAAAGGATCTACAGGCATCAGCTTCTCACAGGAAACTGAGTCTCTAATCGATAGGGAAACTGATATCAAATCCAACGTCACTGGTTTTGCCTCAGCTTCTTTAGCATCCAAGGCCTTCTGGTTATGGATAAATCCATTGTTGAGTAAAGGGTACAAGTCATCTTTGAAGATGGATGAAGTCCCGTCACTTTCGCAAGAACATAGAGCTGAAAGAATGTCAGTATTGTTTGAACAGAAATGGCCTAAGCCACAAGAAAGGTCGAAGCATCCTGTTCTAACCACATTGCTTCGATGCTTCTGGAAGGAAGTAGTATTCATTGCTTTCCTTGCAATTGTTAAACTCAGTGTTGTGTTCATAGGTCCAGTTCTCATCCAAAGGTTCGTTGATTTCACGGGAGGTAAGAGAAGCTCTATATATGAAGGGTACTACCTTGTGCTAATCCTTGTCATTGCAAAATTCACAGAAGTTTTAACTGTTCACCATTTCAACTTCAATTGTCAGAAGCTAGGAATGCTAATCCGATGCAGTCTCATTACCTCATTGTACAAGAAAGGGCTAAGGCTGTCATGTTCTTCACGGCAAGACCACAGTATTGGAACTATAGTGAATTACATGGCTGTGGATGCACAACAACTTTCTGATATGATGCCGCAGCTTCATTTTATCTGGATGATGCCAATTCAAGTTGGAATTTCCTTGTTCCTGCTTTACAAATACTTAGGTGTGACTGTGGTCACAGCTTTACTTGGAATTGTGGGTGCTCTTGTGTTTGTCGTGTTTGGTACTCAAAGAAACAATCAATTCCAATTCAATGTGATGAAGAATCGTGATTCAAGAATGAAAGCTGTGAATGAAATGCAATACGTGAGAGTGATCAAGTTCCAAGCATGGGAAGAGCATTTCAATAGGAGGATTATGGGTTTTCGTGAGTCAGAATTTAGTTGGCTTTCTAAGTTCATGTATTCAATGTCTGGGAATATCATTGTGATGTGGATCACGCCACTATTGATATCAACTCTAACATTTGGGACAGCAATTTTGCTTGGAGTTCCACTTGATGCAGGGACAGTTTTCACCACAACAACAATCTTTAAAATATTACAGGACCCTCTTAGGACGTTTCCACAATCAATGATCTTTCTTTCACAAGCAATGGTATCACTTGGGAGATTGGATAGGTATATGATGAGTAAGGAATTATCAGATAATTTAGTAGGGAAGGAGGAATGTTGTGGGGGGCAAACTGCTGTGGAGGTGAAAGATGGCATCTTTAGCTGGGATGATGATAGTAAAGGGGACTATGACTTGAAAAATATTAGTTTGGATATAAAAAGGGGTGAACTTACAGTTATTGTTGGGACCGTGGGCTCTGGAAAATCTTCTCTCCTGGCATCCATTCTTGGTGAGATGCACAAAATATCTGGGACGGTTCGGGTTAATGGAAGTATTGCGTATGTAGCCCAAACATCATGGATTCAAAATGGGACAATCCAAGATAACATCCTGTTTGGATCACTAATGGACAGACAAAAGTACAGTGAAGTTGTGAGAGTTTGTTGCTTGGACAAGGACTTGGAAATGATGGAGGATGGGGATCAAACAGAGATTGGAGAGCGTGGCATCAATCTTAGCGGAGGACAGAAGCAGCGAATCCAACTTGCTAGGGCTGTATATCAAGACTGTGATATCTATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCATACTGGCTCTGCAATATTCAAGGAATGTGTTAGGGGAGCTTTAAAAGGGAAGACTGTTGTTCTTGTAACACATCAAATAGACTTCTTGCATAACGTTGATCTTATAATGGTGATGAGAGATGGAATGATAGTCCAATCTGGGAAGTATAATGATCTTTTAAATTCTGGAATGGATTTTGGAGATCTGGTAGCAGCACATGAGACATCCATGGAACTTGTAGAACAAGGCAAAGACATGCCTGGTGAGAATTCCCCTAGACTATCCAAATCTCCCAGGTCTCCAAAGCCAACTTCCAGTTTTAGAGAAACCAATGGTGAAAGTTATTCTCTTGACCAACCCAAGGCCAGCAAGGAAAATTCTAAACTCATTAAAGATGAAGAAAGGGAAACTGGCAAAGTGAGCTTGCATATATATAAATTATATTTCACTGAGGCTTATGGGTGGTGGGGCATTATAGGAGTAATTCTCATTTCTTTGTTATGGCAAGCTTCTTTGATGGCTGGTGATTATTGGTTGGCATATGAAACCTCAGAAGAGGAAGCTCGAATCTTTAACCCGTCTCTATTCATCTCCATGTACGCCATTATTGCTTCAGTTTCACTTGTCATGCTGATTATAAGATCCTTCTCTGTTACCATCTTGTGGCTTAAGACGGCACAAATTTTCTTCTCTCAGATTCTTAATTGCATCCTGCATGCACCTATGTCTTTCTTTGACACTACCCCTTCTGGAAGAATTTTAAGTAGGGCATCCACCGATCAGACTAATGTCGATGTCTTTATCCCAGTTTTTATGGGTCTTGTGATTCACTTTTACACCACAGTACTTGGCATCTTCATCGTGACATGTCAAAATTCATGGCCTACAGTTTTCTTGCTGATTCCTCTTATTTGGTTGAATATATGGTATCGGGGTTATTTCCTTTCATCATCTCGTGAGTTGACTCGCTTGGATTCAATAACAAAAGCACCTGTTATTCATCACTTCTCAGAAAGCATTTCAGGGGTCATGACCATCCGTGCATTCAAAAAGCAAAGGAAATTTTGTGAAGAAAATGTCAAACGAGTGAATGAAAATCTTCGTATGGATTTCCACAACAATGGTTCCAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTTGGAAGCTTGGTCTTCTGTATTTCTACTTTGTTCATGATTATGTTACCCAACAATATCATAAAGCCAGAAAATGTTGGCTTATCCCTCTCTTATGGGTTGTCCTTGAATGCTGTGTTGTTCTTGGCTATATACATGGGTTGCTTCATTGAGAACAGAATGGTATCTGTTGAGAGGATCAAGCAGTTCACAAAAATTCCGTCAGAAGCATCGTGGCATATTCAAGATCTCCTACCTCCTCCGAGCTGGCCTGCCCATGGCAATGTTAATATCAAAGACTTGCAGGTTAGGTATCGTCCCAACACTCCTTTGGTTCTTAAAGGCATCAGTTTAAGCATTAGCGGGGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGAAGTGGAAAGTCAACTTTTATCCAAGTTTTCTTCAGGCTGGTTGAACCTTCAGGAGGTGGAATAATCATTGATGACATCGACATAACCGCCTTAGGCCTTCACGATCTCAGGTCTCGTTTTGGCATCATTCCCCAGGAACCTGTTCTTTTTGAGGGCACTGTCAGAAGCAATGTTGACCCCACTGGACTGTATTCAGATGAAGACATATGGAAGAGCTTGGAACGTTGTCAACTAAAAGATGTTGTGGCTTCCAAGCCTGAGAAACTTGACTCTTTAGTGGTTGATAATGGAGAGAATTGGAGCGTGGGGCAGAGGCAGTTATTGTGTCTGGGGAGGGTTATGCTGAAGAGAAGTCGTCTCTTGTTCTTGGATGAAGCAACAGCTTCTGTGGATTCACAAACTGATGCTGTGATTCAAAAGATAATCAGAGAGGACTTTTCAGCATGCACCATCATTAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGATAAGGTTTTGGTCATCGATGCTGGACGAGCAAAAGAATTTGATAAACCCTCCAAGTTGCTCCAGACGCCATCATTTTTTGGGGCGTTAGTTCAAGAATATGCCAACCGCTCCTCCGAACTCTGA 4518 0.4143 MNSATWITSLSCSSPVKRAPGVTFLSTLPQWLQFFFLSPCFQRALWSAIDAMLILVLFVLAIKKLSSKFTTNGGDPTSELDKPLIRHNSAFIRTTMWFKLTLIVTVALTILYAVASFLAFVRDAQVSWKLVDGSFWIVQALTHVVLTILIIHEKRFQAVSHPIPLRIFWIANFIVTSLFVVSGVVRLVSEHEGGFEFKNDDTVCFISFPPSLLLFLVAIKGSTGISFSQETESLIDRETDIKSNVTGFASASLASKAFWLWINPLLSKGYKSSLKMDEVPSLSQEHRAERMSVLFEQKWPKPQERSKHPVLTTLLRCFWKEVVFIAFLAIVKLSVVFIGPVLIQRFVDFTGGKRSSIYEGYYLVLILVIAKFTEVLTVHHFNFNCQKLGMLIRCSLITSLYKKGLRLSCSSRQDHSIGTIVNYMAVDAQQLSDMMPQLHFIWMMPIQVGISLFLLYKYLGVTVVTALLGIVGALVFVVFGTQRNNQFQFNVMKNRDSRMKAVNEMLXYVRVIKFQAWEEHFNRRIMGFRESEFSWLSKFMYSMSGNIIVMWITPLLISTLTFGTAILLGVPLDAGTVFTTTTIFKILQDPLRTFPQSMIFLSQAMVSLGRLDRYMMSKELSDNLVGKEECCGGQTAVEVKDGIFSWDDDSKGDYDLKNISLDIKRGELTVIVGTVGSGKSSLLASILGEMHKISGTVRVNGSIAYVAQTSWIQNGTIQDNILFGSLMDRQKYSEVVRVCCLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKGKTVVLVTHQIDFLHNVDLIMVMRDGMIVQSGKYNDLLNSGMDFGDLVAAHETSMELVEQGKDMPGENSPRLSKSPRSPKPTSSFRETNGESYSLDQPKASKENSKLIKDEERETGKVSLHIYKLYFTEAYGWWGIIGVILISLLWQASLMAGDYWLAYETSEEEARIFNPSLFISMYAIIASVSLVMLIIRSFSVTILWLKTAQIFFSQILNCILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPVFMGLVIHFYTTVLGIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFKKQRKFCEENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCISTLFMIMLPNNIIKPENVGLSLSYGLSLNAVLFLAIYMGCFIENRMVSVERIKQFTKIPSEASWHIQDLLPPPSWPAHGNVNIKDLQVRYRPNTPLVLKGISLSISGGEKIGVVGRTGSGKSTFIQVFFRLVEPSGGGIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNVDPTGLYSDEDIWKSLERCQLKDVVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFSACTIISIAHRIPTVMDCDKVLVIDAGRAKEFDKPSKLLQTPSFFGALVQEYANRSSEL 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1497 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 249 1500 - -
Prci13g1497 1506 CDD ABCC_MRP_domain2 1262 1482 - -
Prci13g1497 1506 CDD ABC_6TM_ABCC_D2 947 1239 IPR044726 GO:0140359
Prci13g1497 1506 FunFam ABC transporter C family member 5 910 1245 - -
Prci13g1497 1506 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Prci13g1497 1506 SUPERFAMILY ABC transporter transmembrane region 305 615 IPR036640 GO:0005524|GO:0016020
Prci13g1497 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1497 IPR027417 -
Prci13g1497 1506 Gene3D ABC transporter type 1, transmembrane domain 910 1245 IPR036640 GO:0005524|GO:0016020
Prci13g1497 1506 Gene3D ABC transporter type 1, transmembrane domain 295 617 IPR036640 GO:0005524|GO:0016020
Prci13g1497 1506 SMART AAA_5 1290 1483 IPR003593 GO:0016887
Prci13g1497 1506 SMART AAA_5 665 846 IPR003593 GO:0016887
Prci13g1497 1506 CDD ABCC_MRP_domain1 637 837 - -
Prci13g1497 1506 Gene3D - 618 880 IPR027417 -
Prci13g1497 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1264 1498 IPR003439 GO:0005524
Prci13g1497 1506 MobiDBLite consensus disorder prediction 882 908 - -
Prci13g1497 1506 Coils Coil 1135 1155 - -
Prci13g1497 1506 FunFam ABC transporter C family member 10 306 619 - -
Prci13g1497 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 861 IPR003439 GO:0005524
Prci13g1497 1506 SUPERFAMILY ABC transporter transmembrane region 944 1244 IPR036640 GO:0005524|GO:0016020
Prci13g1497 1506 FunFam ABC transporter C family member 3 1247 1498 - -
Prci13g1497 1506 Pfam ABC transporter 1281 1429 IPR003439 GO:0005524
Prci13g1497 1506 ProSitePatterns ABC transporters family signature. 763 777 IPR017871 GO:0005524|GO:0016887
Prci13g1497 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 859 IPR027417 -
Prci13g1497 1506 MobiDBLite consensus disorder prediction 869 908 - -
Prci13g1497 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 948 1227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1497 1506 Gene3D - 1248 1498 IPR027417 -
Prci13g1497 1506 Pfam ABC transporter 656 789 IPR003439 GO:0005524
Prci13g1497 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1497 1506 Pfam ABC transporter transmembrane region 323 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1497 1506 Pfam ABC transporter transmembrane region 980 1191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g1497 1506 FunFam ABC transporter C family member 4 620 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1497 Prci-Chr13 20072097 20095838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1497 637 854 Calmodulin-binding Proteins AT2G36910 31.915 1.73e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1497 - K05666 gmx:100793361 2274.59