Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1495 ATGGCTTCCCCTTCTTCTTGTTCTCCTGTTGACTCCTCCGCCACCACCGCGCCTGCCGATCCTCCCACCGCCGTCCCTCTCGCCGTTCCTGTTCCTCCGGTTCTGCCCTCTTCGCAGCCCTCGTCCTCCTCCTCTCGTCGCCTTCCTCCGCCGTGCTGGTCTGCTGAGGAAACTGTTGCTCTCATCGACGCGTACCGTGACAAGTGGTATTCTCTTGGCCGGGGTAATCTTAAGGCCACGCATTGGCAAGATGTCGCCGATGCGGTTGCTTCTCGCTGCCCGGGCGCGTCACCGCCCAAAACTGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGGTACCGCACCGAGGTCCAACGCGCGCGCAACCTTCCTGTCGCTAGGTTCAATTCCTCTTGGGTCCACTTTAAGCGGATGGATTCCATGGAAAAAGGCCCTTCCCCTGTCAAGCCCGAGAACGTTTCCGATGATAGCCCCGATGAGTTTGACGGCGATGAGGATAATGACTTGTACGAGGAATTCAGAAGCGTTAGTGGATCCAACACAAGGAGCTTGAATAAGTTGTGTCGGAATGGGATGGGTGGCAGCAACGGCAGCGGTGGATTTCGGATTCGAATTCCCAATGGGGTAAGCATTGCACAACCTGGGAATTCCAAGTTGTATGGGAAAATTGCTGATCAGAAATACAACTATAACAATAACAACCCCAGTTCAAAATCTGGGCATGGCTTTAATTGTAGTCCCAATTATGAAACTAGAGTTTTGAAAGAGAGAAGTGGGTTGGGAAAAAGAGAAAGAGAGAAGGAGCGAGATCCTCTCAGTGAGATGGTATGTGCAATTAAGGTTTTGGGAGATGGGTTTGTGAAGATGGAGCAGATGAAAATGGAGATGGCGGGGGAGATTGAGAGTATGCGTATGGAGATGGAGATGAAGCGTACTGAGATGATTCTGGAGTCACAGCAGCGGATCGTGGAGGCTTTTGCAAAAGCAGTTTCAGAGAAGAAGACAAAGAGAATGCCTTCATCGCCTTCAGAATCATAG 1047 0.5215 MASPSSCSPVDSSATTAPADPPTAVPLAVPVPPVLPSSQPSSSSSRRLPPPCWSAEETVALIDAYRDKWYSLGRGNLKATHWQDVADAVASRCPGASPPKTAVQCRHKMEKLRKRYRTEVQRARNLPVARFNSSWVHFKRMDSMEKGPSPVKPENVSDDSPDEFDGDEDNDLYEEFRSVSGSNTRSLNKLCRNGMGGSNGSGGFRIRIPNGVSIAQPGNSKLYGKIADQKYNYNNNNPSSKSGHGFNCSPNYETRVLKERSGLGKREREKERDPLSEMVCAIKVLGDGFVKMEQMKMEMAGEIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKTKRMPSSPSES 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1495 348 FunFam Trihelix transcription factor ASIL2 53 118 - -
Prci13g1495 348 Gene3D - 53 118 - -
Prci13g1495 348 SMART 118neu2 60 149 IPR006578 -
Prci13g1495 348 MobiDBLite consensus disorder prediction 23 37 - -
Prci13g1495 348 Coils Coil 106 126 - -
Prci13g1495 348 MobiDBLite consensus disorder prediction 142 169 - -
Prci13g1495 348 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 335 IPR044823 -
Prci13g1495 348 Pfam Myb/SANT-like DNA-binding domain 51 144 IPR044822 -
Prci13g1495 348 MobiDBLite consensus disorder prediction 1 19 - -
Prci13g1495 348 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1495 Prci-Chr13 19875191 19877048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1495 27 144 Trihelix Transcription Factor Family AT3G14180 35.246 5.81e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci13g1495 Myb_DNA-bind_4 5.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1495 - - pcin:129290378 572.778