Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci13g1487 | ATGGCATTGGTTGTGCCTGCCCTTCCTTTCACGTTCGTCGTTCATTTTCTTACCATTATAAGTTACAAATCTCTTGCATTGAAGAAAGAGTTGAAGAAGCTGATACATCTTGTTTTGCACGCTATCACAATAGCACTTGGAATCATTGGAATCTATTGCACCTTCAAGTACGATAATGAAAGTAGGATTGCCAGTCTGTACAGCTTGCATTCCTGGCTTGGAATTGTTGTCATTTCCCTTTACTACATTCAACTTGAGATAATGAACAAGGAGCAAGGACAGAGGATGCTAAATGATTGA | 300 | 0.3933 | MALVVPALPFTFVVHFLTIISYKSLALKKELKKLIHLVLHAITIALGIIGIYCTFKYDNESRIASLYSLHSWLGIVVISLYYIQLEIMNKEQGQRMLND | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci13g1487 | 99 | ProSiteProfiles | Cytochrome b561 domain profile. | 1 | 99 | IPR006593 | - | |
| Prci13g1487 | 99 | PANTHER | CYTOCHROME B561-RELATED | 17 | 85 | IPR043205 | GO:0016491 | |
| Prci13g1487 | 99 | Gene3D | - | 3 | 87 | - | - | |
| Prci13g1487 | 99 | SMART | 561_7 | 14 | 94 | IPR006593 | - | |
| Prci13g1487 | 99 | Pfam | Eukaryotic cytochrome b561 | 19 | 85 | IPR006593 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci13g1487 | Prci-Chr13 | 19805442 | 19805741 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci13g1487 | 18 | 84 | Chloroplast and Mitochondria Gene Families | AT4G25570 | 68.657 | 8.16e-24 | 90.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci13g1487 | K08360 | - | pcin:129289943 | 177.563 |