Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1479 ATGAAGAGCACACCACTGTGGAAGCTCACTTTGCAAGTGTTTGTTTCGTTCATCATTATTGCTAGCCACTTGGCACGACCAGTAGTTGCAGAAGGTGGTGATTCAGGTTTCATCAGCATAGACTGTGGAGCAAGCCGAGATTACGTAGATGATGTAACGGGGATTCAGTACCAGACAGATGAAGGCTTCATTGAAAGCGGAACTAATTATGAATTATCATCACCGGCCAATGAATTATTATCAAACATTAATTGCCTTAGTAATTTTCCAACCGGTGAACGACAGCTAATGACGCTGAGAAGTTTCTCGGAGGGACGAAGAAACTGTTACGCTCTAAAACCAAAGCACGAGATTGAGCAGAAGTATCTAATCAGAGCCTTGTTTGCATATTGGAATTATGACTCTAAAAACCAAGGTCCAGCGTTTGACCTTTACCTGGGGGTCAATTACTGGACCACTGTTTACTTATTTTATCAGCCTTGCCAACTCCATGAGATCATATTGCAACGATATAGCAATACAGAAATATTACAAGTGTGCTTGGTAAACACAGGACAAGGCACGCCTTTCATCAATACTTTGGAATTAAGGCCATTAAACAACTCTCTTTATCCGGCTCCACTTCCCCTATATGCTGACTTTGGAAGAGCTGACGTGGGCGCCAGGCTCTCACCCTCTACTACCAGGTACAAAGACGATGTGTACGATCGCTTGTGGTCCAGCTACTATGATCAAAATGATCCCTTTGAAACGAATGTAGAAGTAGAGGCAGAAGACTCCGCTTATAAACTGCCATCAGAAGTATTACGCACTGCTTTGCAACCTCTGAATCATTCGGATCTCTTAACCTTCAATTTGATTTTCCAAAAAATGGGCCAACATTATTTGTTCCTTCATTTTGCTGAAATTCAAAAGCTTCCTCCTGGCCACAAGAGGATTATGAATGTCACTTTTGACGATGATAATTCCTTGTCTCAGCAACTTACTCTTGAATACTTGAAGCCTATTACCCTATGTTCTAACAAGATCACTAAAGGTTATATAAACTTCACTATTAGAGCAGCAGCTGCTTCGGATGCTCCTCCTATTCTTAATGCTTTTGAAGTTTATATATCCCTCCCACAACTGAATTTCCCAACAGCTACACTGGATGTTAATGCTATCATGCAAATCAAGCATATTTATGGGATCTGTAGAATCAGTTGGCAAGGCGACCCATGTGTTCCATCTAAGTTAACATGGGATGGTCTGAATTGCAGCTCTGGCGATAATATAAGGATAATTTCTTTGAACTTGAGCTCAAGCAAACTCACTGGACAAATTGCTACAGCCATTGCTAGTTTGGAAAAACTGGAGTCCTTGGATTTGTCGAAAAATGAATTGATCGGTCCACTACCAGAATTTCTGGCAACTCTTCCTAATTTGAGACTCATTGATGTGTCAGGAAACAAGCTCACAGGTTCAATTCCTAAGGCTTTTAGGGAGAAAGCCAATTTGGAGCTAAGAGTGGCTAATAATCCAGGCCTTTGTCAGACAAATTCCTGCAAAGGACATAAGTTTTTAATTCCACTTATTGAATCAGTTTCAGCTTTGGTCATCGTTAGTGTCCTTGTTTCTTTGGTGATCTGGAGATTTAGAAAGAAAAGAGGTATTGCTTTTTACCTATATATGATGGAAATTCTAAAACCAAAAAATCAAGTGTTTTCTTGCTCTGAGGTTCTATGTATCACAAACAATTTGGAAACTACTATTGGAGAAGGAGGGTTTGGGAAAGTTTACCTCGGCACTTTAAGTGATGATACACAGGTTGCTGTTAAGCTACTTTCTCCATCTTCAAGGCAAGGGTATAGGGAATTTCAATTAGAGGCTCAACTCTTAACAGTCATCCATCATAGAAACTTGGTTTCACTTGTTGGATTTTGTGATGAAAACGATGTCAAAGCATTGATCTATGAATATATGGATCTTGGAGACCTCAACGCACTATTGTCAGATAAAAACTCAGAAGTTTTAAAATGGAATGAGAGACTTCAAGTTGCTGTAGATGCAGCCAGAGGATTGGAATATCTTCATGATGGTTGTAACACTCCCATTATCCATAGAGACTTGAAACCATCCAACATTTTATTAAATAATTGCATGGTAGCCAAGATTTCTGATTTTGGACTATCTAGGGAATTTAAAAATGAAAAAGATTCTCATTTATCAACTCAACCAGCTGGAACACTTGGTTATATTGATCCTGAATTCCAAAGGTCTAGAAAACTAAACAAAAAAAGTGACATATATAGTTTCGGGATGATTCTTCTTCAACTAATCACAGGCCATCCCCCAATAAGAAGAGAACTTGAGGATAATTGTTTCATCATTGATTGGATCCGTCCAAAAATTGAGTGTGGGGATATCCAAGGCATTGTTGATCTAAGGTTGACAGGTGAATTCCTAGCTGCTTCTGCATGGAAAGCTATTGAGATAGCAATGTCATGCATTGCACCTCAGTCCATCCAAAGGCCAGACATTAGTTATGTGTTGCAAGAACTAAAGGACTGTTTAGTTATGGAGATGTGTCTTGCCAATTCAAATGGCATACCAAGGCATTCAATCAATCATTCTGGGCAGCTTGATTCAATCTCTACCCCCTCAGCTAGGTAG 2652 0.3963 MKSTPLWKLTLQVFVSFIIIASHLARPVVAEGGDSGFISIDCGASRDYVDDVTGIQYQTDEGFIESGTNYELSSPANELLSNINCLSNFPTGERQLMTLRSFSEGRRNCYALKPKHEIEQKYLIRALFAYWNYDSKNQGPAFDLYLGVNYWTTVYLFYQPCQLHEIILQRYSNTEILQVCLVNTGQGTPFINTLELRPLNNSLYPAPLPLYADFGRADVGARLSPSTTRYKDDVYDRLWSSYYDQNDPFETNVEVEAEDSAYKLPSEVLRTALQPLNHSDLLTFNLIFQKMGQHYLFLHFAEIQKLPPGHKRIMNVTFDDDNSLSQQLTLEYLKPITLCSNKITKGYINFTIRAAAASDAPPILNAFEVYISLPQLNFPTATLDVNAIMQIKHIYGICRISWQGDPCVPSKLTWDGLNCSSGDNIRIISLNLSSSKLTGQIATAIASLEKLESLDLSKNELIGPLPEFLATLPNLRLIDVSGNKLTGSIPKAFREKANLELRVANNPGLCQTNSCKGHKFLIPLIESVSALVIVSVLVSLVIWRFRKKRGIAFYLYMMEILKPKNQVFSCSEVLCITNNLETTIGEGGFGKVYLGTLSDDTQVAVKLLSPSSRQGYREFQLEAQLLTVIHHRNLVSLVGFCDENDVKALIYEYMDLGDLNALLSDKNSEVLKWNERLQVAVDAARGLEYLHDGCNTPIIHRDLKPSNILLNNCMVAKISDFGLSREFKNEKDSHLSTQPAGTLGYIDPEFQRSRKLNKKSDIYSFGMILLQLITGHPPIRRELEDNCFIIDWIRPKIECGDIQGIVDLRLTGEFLAASAWKAIEIAMSCIAPQSIQRPDISYVLQELKDCLVMEMCLANSNGIPRHSINHSGQLDSISTPSAR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1479 883 SUPERFAMILY L domain-like 410 500 - -
Prci13g1479 883 Pfam Leucine rich repeat 429 485 IPR001611 GO:0005515
Prci13g1479 883 CDD STKc_IRAK 584 848 - -
Prci13g1479 883 PANTHER OS07G0107800 PROTEIN-RELATED 38 851 - -
Prci13g1479 883 Gene3D Phosphorylase Kinase; domain 1 584 654 - -
Prci13g1479 883 FunFam Leucine-rich repeat receptor-like kinase 383 512 - -
Prci13g1479 883 SUPERFAMILY Protein kinase-like (PK-like) 563 847 IPR011009 -
Prci13g1479 883 Gene3D Ribonuclease Inhibitor 387 511 IPR032675 -
Prci13g1479 883 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 654 859 - -
Prci13g1479 883 Pfam Malectin-like domain 40 370 IPR024788 -
Prci13g1479 883 Gene3D Transferase(Phosphotransferase) domain 1 655 860 - -
Prci13g1479 883 FunFam receptor-like protein kinase FERONIA 549 653 - -
Prci13g1479 883 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Prci13g1479 883 ProSiteProfiles Protein kinase domain profile. 578 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1479 883 SMART serkin_6 578 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1479 883 Pfam Protein tyrosine and serine/threonine kinase 580 780 IPR001245 GO:0004672|GO:0006468
Prci13g1479 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1479 Prci-Chr13 19456660 19461545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1479 14 851 Receptor kinase-like Gene Family AT2G19210 40.650 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1479 Malectin_like 1.1e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1479 - - pcin:129289942 1743.4