Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1478 ATGAAGAGCACACCACTGTGGATGCTCGCCTTGCAAGTGTTTGTTTCGTTTATCATCATTGCTAGCCACTTGGCACAACCAGTAGTTGCAGAAGGTGGTGATTCAGGTTTCATCAGCATAGATTGTGGAGCAAGCCGAGATTACGTAGATGATGTAACGGGGATTCAGACCAGACAGATGAAGCTAATGACGCTGAGAAGTTTCTCGGAGGGAGGAAGCAACTGTTACACTCTAAACCCAAAGCAAGAGATTGAGCAGAAGTATCTAATCAGAGTCCTGTTTGCATATTGGAATTATGACTCTAAAAACCAAGGACAAGGCACGCCTTTCATCAATACTTTGGAATTAAGGCCATTAAACAACTCTCTTTATCCGGCTCCACTTCCCCTATATGCTGACTTTGGAAGAGCTGACGTGGGCCTTAGGCTCTCACCCTCTACTACGAGGTACAAAGACGATGTGTACGATCGCTTGTGGTCCAGCTACTATGATCTAAATGATCCCTTTGAAACGAATGTAGAAGTAAAGGCAGAACACTCCGTTTATAAACTGCCATCAGAACTTCCTCCTGGCCACAAGAGGATTATGAATGTCACTTTTGATGATGATAATTCCTTGTCTCAGCAACTTACTCTTGAATACTTGAAGCCTATTACCCTATGTTCTAACAAGATCACTGAAGGTTATATAAACTTCATTATTAGAGCAGAAGCTGCTTCAGATGCTCCTCCTATTCTTAATGCTTTTGAAGTTTATATATCCCTCCCACAACTGAATTTCCCAACAGCTACACTGGATGTTAATGCTATCATGCAAATCAAGCATATTTATGGGATCTGTAGAATCAGTTGGCAAGGCGACCCATGTGTTCCATCTAAGTTAACATGGGATGGTCTGAATTGCAGCTATGGCGATAATATAAGGATAATTTCTTTGAACTTGAGCTCAAGAAAACTCACTGGACAAATAGCTACAGCCATCGCTAGTTTGGAAAAGCTGGAGTCCTTTGATGTGTCAGGAAACACGCTCACAGGTTCAATTCCTAAGGCTTTTAGGGAGAAAGCCAATTTGGAGCTAAGAGTGGCTAATAATCCAGGCCTTTGTCAGACAAATTCCTGCAAAGGACATAAGTTGTTAATTCCACTTATTGAATCAGTTTCAGCTTTGGTCATGGTTACTGTCCTTGTTTCTTTGGTGACCTGGAGATTTAGAAAGCAAAGAGTTTTGTCTACTGAATCTCCGAAAAGGATGGAAATTCTAAAACCAAAAAATCAAGCTTTTTCTTGCTCTGAGGTTCTATGTATCACAAACAATTTCGAAACTACTATTGGAGAAGGAAGGTTTGGGAAAGTTTACCTCGGCACTTTAAGTGATGATACACATGTTGCTGTTAAGTTACTTTCTCCATCTTCAAGGCAAGGGTATGAGGAATTTCAATTAGAGGCTCAACTCTTAACAGTCATCCATCATAGAAACTTGGTTTCACTTGTTGGGTTTTGTGATGAAAACGATGTCAAAGCATTGATCTATGAATACATGGATCTTGGAGACCTCAACGCACTATTGTCAGGTTCATTTTAA 1581 0.4067 MKSTPLWMLALQVFVSFIIIASHLAQPVVAEGGDSGFISIDCGASRDYVDDVTGIQTRQMKLMTLRSFSEGGSNCYTLNPKQEIEQKYLIRVLFAYWNYDSKNQGQGTPFINTLELRPLNNSLYPAPLPLYADFGRADVGLRLSPSTTRYKDDVYDRLWSSYYDLNDPFETNVEVKAEHSVYKLPSELPPGHKRIMNVTFDDDNSLSQQLTLEYLKPITLCSNKITEGYINFIIRAEAASDAPPILNAFEVYISLPQLNFPTATLDVNAIMQIKHIYGICRISWQGDPCVPSKLTWDGLNCSYGDNIRIISLNLSSRKLTGQIATAIASLEKLESFDVSGNTLTGSIPKAFREKANLELRVANNPGLCQTNSCKGHKLLIPLIESVSALVMVTVLVSLVTWRFRKQRVLSTESPKRMEILKPKNQAFSCSEVLCITNNFETTIGEGRFGKVYLGTLSDDTHVAVKLLSPSSRQGYEEFQLEAQLLTVIHHRNLVSLVGFCDENDVKALIYEYMDLGDLNALLSGSF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1478 526 FunFam receptor-like protein kinase FERONIA 403 512 - -
Prci13g1478 526 ProSiteProfiles Protein kinase domain profile. 437 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1478 526 SUPERFAMILY L domain-like 300 357 - -
Prci13g1478 526 FunFam Leucine-rich repeat receptor-like kinase 265 373 - -
Prci13g1478 526 Pfam Protein tyrosine and serine/threonine kinase 439 523 IPR001245 GO:0004672|GO:0006468
Prci13g1478 526 Gene3D Ribonuclease Inhibitor 269 370 IPR032675 -
Prci13g1478 526 SUPERFAMILY Protein kinase-like (PK-like) 415 525 IPR011009 -
Prci13g1478 526 Pfam Malectin-like domain 103 187 IPR024788 -
Prci13g1478 526 Gene3D Phosphorylase Kinase; domain 1 409 512 - -
Prci13g1478 526 PANTHER OS07G0107800 PROTEIN-RELATED 103 520 - -
Prci13g1478 526 ProSitePatterns Protein kinases ATP-binding region signature. 443 465 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1478 Prci-Chr13 19340835 19344315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1478 14 524 Receptor kinase-like Gene Family AT2G19210 32.526 1.67e-83 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1478 PK_Tyr_Ser-Thr 3.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1478 - - pcin:129289940 1045.42