Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1358 ATGGCTGGGCAATCTGATCCTCACCTCTCTCTGTTTTCAGCCGAAGAGCTTGAATTTGTGGCGGAGGATGACATGGTTGAGATCGTACCCAATCTCAAAATGGATGCTCTCAATCTGATAAGTGGAGATTTTGGTCCGTTTGCTCCACAAATAGCTACTCAAGTGCCATTGTGGTTGGCTGTGGCTTTGAAGAAGAGAGGAAAGTGCTCTATTCGCCCTCCTGAATGGATGTCAGTTGATAATTTAACTCAAGTTCTGGAGGCTGAGCGAGAATCTCAGGAAATGTCTGAAAAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTCTTTGATCATGCACGTGATGACATTCCTGATGTATATATGGTGAGGTCTCTAATTGAGGACATACGAGATGTAAGATTTCATAAAGTAAGGACTGACTTAGAGGCATTCAATGGCCGTACAATTGCCGTCAAGATTAAGAATTTGTCGGCAATGGAGGTGAATATTGTTCGCCCATTTATTAGAAGAGCTTTGCAGGCATTTTGTAAGCATGATAGTCCAGAGTTGATACCAGACCCAGAGAGAGTGGCTGACAGACGTCCACAATTAGTCAACAATGCTCCAAGAAGGCAATTGCGACGATGA 633 0.4281 MAGQSDPHLSLFSAEELEFVAEDDMVEIVPNLKMDALNLISGDFGPFAPQIATQVPLWLAVALKKRGKCSIRPPEWMSVDNLTQVLEAERESQEMSEKLPFHYVEISRLLFDHARDDIPDVYMVRSLIEDIRDVRFHKVRTDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRALQAFCKHDSPELIPDPERVADRRPQLVNNAPRRQLRR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1358 210 Gene3D - 12 77 - -
Prci13g1358 210 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Prci13g1358 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Prci13g1358 210 CDD GINS_B_Psf2 13 74 - -
Prci13g1358 210 Gene3D - 78 185 - -
Prci13g1358 210 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Prci13g1358 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 199 IPR007257 GO:0005634|GO:0006260
Prci13g1358 210 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Prci13g1358 210 CDD GINS_A_psf2 66 182 - -
Prci13g1358 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Prci13g1358 210 Pfam GINS complex protein 53 162 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1358 Prci-Chr13 12578865 12582804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1358 1 147 Core DNA Replication Machinery Family AT3G12530 74.150 1.16e-81 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1358 K10733 - gmx:100780528 369.007