Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1345 ATGGGCGATATTGAAGACCCATCTTCGGGATTGAACAATATCTTGCAGAGCAGTGGTGCTGGGTCTCATATGGTGGATTTCAATGGAGGTTTTGGGGTGGTAGATCAAGGGTTTGAGCTTGAACCTGTAACTTGTGGGAACATAATCAGTCATAGCACTTCAGAACCCATTTTCTCGGCTTCAGCAACCAATCCTCTGATGATGTCATCTTCTCCATTGGTGTTCAATTCTCAGGCGCAAGTAAGTTCATCGGTCGAAGACAAGTTAAACCGGAATCAAGTCCAATTCTCTGAGAATCCATCTTTCTTTATGCCACTGTCATACCCACAATTGCAAGAGCAGCAAGTTTATTCTCAGCCTCAAGCAAAACGGCTTCTTTGTGACACAATTGGGCAAGGCTATCAGGTGCCGAAGGGTGCGGTATTGGATTCGGGGCAAGAGCTATTGGCTAGGAGGCAGCAATTGCAGCTTCCTATGAACACTCAACATGTGCACCATCAATGGCAATCCTTAATTGAGCCACCATTGAAACAGCAGAAGGTGAGCTCTGCAGGGGATGATTTCGCAACTCAAGAGCTCCAGCAGACTATAATTGAAATGATTTTCAAGGCTGCGGAGCATATCGAAGCCGGTAACCCGGTAAATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCATTTCAGAGGGCTGCATTCTATATGAAGGAAGCCTTGCAGTTACTGCTGCATTCAAATGGGCAAAGCTTATTGGCTTTCTCGCCCATCAGTTTCATATTCAAAATTGGAGCTTATAAGTCATTCTCTGATATATCTCCAGTCATTCAGTTTGCTAATTTTACTTGTAATCAAGCGCTCATTGAGGCTGTGGAGAGTTTTGAGAGGATTCACATTATTGATTTTGATATTGGGTTTGGAGTGCAATTGGCTTCTTTCATGCAAGAGCTGGCCTTGAGGAATGGTGGTGCACCTTCCCTGAAAGTTACTGCAATTGTATCCCCATCCACCTGTGATGAATTTGAGCTCAATTTTACCCGAGACCACTTGAAACAATATGCCAAAGAAATCAACATATCCTTTGAGCTTAATGTTATGAGCATTGAATCATTAAACTCTACTTCCTGGCCCCTTCCTAGTCGATTCCCCGATTCAGAAGCAATTGCTGTGAATTTGCCTGTTTCTTGTTTCTCAAATTACCCTCCATCCTTTCCTGTGGCCCTTCGCTTTGTAAAGCAACTCATGCCAAAAATTGTGGTCACCTTGGATAGAAGCTGCGATCGAATCGATGTCCCATTCCCCCACAGTTTAATCCATGCCCTTCAATCTTACTCAGCCTTGCTTGAATCCCTGGATGCTGTGAACGTGAACCTCGATGTCCTCCAAAAGATTGAGAGGCACTTTGTCCAACCGGCCATCGAGAAGATCATACTAGGTCGCCACCAATGCAGGGGAAAGTTTGCCCCATGGAGGAGCCTACTTCTCTCATCTGGGTTCTCTCCCTTCTCATTCAGTAACTCTACAGAAGCTCAAGCCGAGTGCTTGGTGCAGAGGGCGGCTGTGAGGGGATTCCAAGTGGATAGGAAGCATTCTTCTCTTACCTTATGCTGGCAGAGGAAGGAACTCATCTCTATTTCAACTTGGAGATGCTGA 1668 0.4562 MGDIEDPSSGLNNILQSSGAGSHMVDFNGGFGVVDQGFELEPVTCGNIISHSTSEPIFSASATNPLMMSSSPLVFNSQAQVSSSVEDKLNRNQVQFSENPSFFMPLSYPQLQEQQVYSQPQAKRLLCDTIGQGYQVPKGAVLDSGQELLARRQQLQLPMNTQHVHHQWQSLIEPPLKQQKVSSAGDDFATQELQQTIIEMIFKAAEHIEAGNPVNAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSNGQSLLAFSPISFIFKIGAYKSFSDISPVIQFANFTCNQALIEAVESFERIHIIDFDIGFGVQLASFMQELALRNGGAPSLKVTAIVSPSTCDEFELNFTRDHLKQYAKEINISFELNVMSIESLNSTSWPLPSRFPDSEAIAVNLPVSCFSNYPPSFPVALRFVKQLMPKIVVTLDRSCDRIDVPFPHSLIHALQSYSALLESLDAVNVNLDVLQKIERHFVQPAIEKIILGRHQCRGKFAPWRSLLLSSGFSPFSFSNSTEAQAECLVQRAAVRGFQVDRKHSSLTLCWQRKELISISTWRC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1345 555 ProSiteProfiles GRAS family profile. 188 554 IPR005202 -
Prci13g1345 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 165 549 IPR005202 -
Prci13g1345 555 Pfam GRAS domain family 198 554 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1345 Prci-Chr13 12356675 12358844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1345 197 555 GRAS Transcription Factor Family AT4G00150 56.630 4.43e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci13g1345 GRAS 1.6e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1345 - - pcin:129291687 1083.55