Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1341 ATGGCATCATCTGTGGAGAATATAACTGTGGTGAGCAGCGACGGTGATGAGTTCAAGATAACCGTCGGAACCGCCATGCAATCGGAGCTATTGAATCGAATGCTGAAGGACGATGATTGCGTCTTTAACAAAGTCCCAATGTCTCCTGTGAACACTGCAACATTGGTGAAAGTGATGGAGTATTGTCAAAAGCATGCTGACGGTGGAGCCTCCGATTCCGGAGACGTTGAAGATCTGAAAAGATGGGACGATGAGTTTATAAAGGTAGATTCAGAGGATATGCTATTTCATATTTTAGTAGCAGCAAACTACTTAGAAATCGTAAGCTTGTTTGATTTAGCTTGCCATGCTGTGGGGAATTTGATGAAGGGAAAAGCTCCCAAAGAGATACCAAGAATTTTCAATATAGAGAATGACTTTAGTCCTGAGGAACAAGAGAGATGTTTCATGAGCATAGATTGTGGAGCAAGCAGAAATTACGTGGATGAAGAAACTGGAATCTGGTACCAAACTGATGAAGACTTCATTGGCAGTGGAGAAAATTATGGAGTATCCCCCGACCTTAATTTCAACAATTTTCCACACGTAAACCGACAGCTACTGACTCTAAGAAGCTTTCCAGAGGGGAAAAGAAACTGTTACACTCTGAAACCAAAACTAATATGGGAGAAGAATCAAAAGTATCTGATTAGAGCAATATTTGCATATGGGAATTATGACTTCAAAAACATGGTTCCAGTTTTTGATCTCTACATTGGGGTCAATTATTGGACAACAATTCATCTTCCTAATTCAACTTTTTTCAGTTTCTTTGAAACAATCCAGCAGGTTCCCTCTGACCAGACGGTTCAGGTGTGCCTGGTGAACACTGGACAAGGCACTCCTTTTATCAACACTTTGGAATTAAGGCTACTAAGTAACTCTCTCTATTCGACCATTTCACTTCCCTTATCTCTATGGTCCAGAGTCAACTGTGGTTCCAAGCTTTCGAGCCTTTTTGTTAGGTACAAGGACGATGTGTTTGACCGATTGTGGAAGACAAATGATGGTAACAATTGGGATGTGTTGAAAGCAAGTGTAGAAGGAAAGGTAGAAATAATCACCCCTTATGAGCTGCCATCAGAAGTATTATGGGCTGCATCGCAGCCCCTAAATGATTCCAAAGTCATAAATGCGAGTTGGAGTTTTTCCGATATATCTAAACATTATTATATGTTTCTTCACTTCACCGAAATTCAAAAGCTTCCTTTTGGCCACAAGAGGATTATCAATGTCACTTTTGATGATGAACATGCACTCTCTCGTGAACTTACACTTGAATACTTGAAGCTTGTCACTTTAATTTCCAACAAGATGACCAAAGATCATGTTGGCTTCAATGTCACAACTGTAGCTAATTCAGATGCTCCTCCTATCCTGAATGCCTATGAAATTTATGAAGTTGGCCCACAACCCAATGCCCCCACAGCAACACAAGATGCTGGTTTTGCAGTTAATGCCATAATGGAAATCAAGCATACTTATGGGATCTCTAGAATCAGTTGGCAAGGGGACCCATGTGCTCCATCAAAATTAGCATGGGATGGCCTGATTTGCAGCTCCGGCAATAATATAAGGATCTTTTCATTGGATTTGTCAAACAATGATTTGATTGGACAGCTACCAGAGTTTCTTTCAACTCTTCCGAATTTGAAATTCCTTAATTTGGCAGGAAACAAGCTCACTGGTTCAATTCCTAAGGCTTTGAAGGAAAATACAAAGTTGCAGCTCAGGGTAGGAAACAATCCAGGTCTTTGCCAATATGATTCCTGCCAAAAACACAAATTTGAAATTCAACATATTGCATCAGTAGCAGCTTCGGTCATCCTAATTGTTGTCGTTTCTTTGGTGATCTGGAGATTTAGACGTAAGAGAGGAGGGTTCGGGAAAGTTTACCTTGGAACTTTAGAAGATGATACACAGGTTGCTGTTAAATTACTTTCTCCAACTTCAAGGCAAGGCTATAGAGAATTTCAACCAGAGGCTCAACTCTTAACAGTCATTCATCATAGAAACTTGGTTTCACTTGTTGGGTTTTGTGATGAAAACGACGTTAAAGCATTGATTTATGAATATATGGATCTTGGAGACCTCAGAGGACTATTGTCAGAGAAAAACTCAAAAGTTTTAAAATGGAACGAGAGACTTCAAGTTGCTATAGATGCAGCAAGAGATTAG 2217 0.4001 MASSVENITVVSSDGDEFKITVGTAMQSELLNRMLKDDDCVFNKVPMSPVNTATLVKVMEYCQKHADGGASDSGDVEDLKRWDDEFIKVDSEDMLFHILVAANYLEIVSLFDLACHAVGNLMKGKAPKEIPRIFNIENDFSPEEQERCFMSIDCGASRNYVDEETGIWYQTDEDFIGSGENYGVSPDLNFNNFPHVNRQLLTLRSFPEGKRNCYTLKPKLIWEKNQKYLIRAIFAYGNYDFKNMVPVFDLYIGVNYWTTIHLPNSTFFSFFETIQQVPSDQTVQVCLVNTGQGTPFINTLELRLLSNSLYSTISLPLSLWSRVNCGSKLSSLFVRYKDDVFDRLWKTNDGNNWDVLKASVEGKVEIITPYELPSEVLWAASQPLNDSKVINASWSFSDISKHYYMFLHFTEIQKLPFGHKRIINVTFDDEHALSRELTLEYLKLVTLISNKMTKDHVGFNVTTVANSDAPPILNAYEIYEVGPQPNAPTATQDAGFAVNAIMEIKHTYGISRISWQGDPCAPSKLAWDGLICSSGNNIRIFSLDLSNNDLIGQLPEFLSTLPNLKFLNLAGNKLTGSIPKALKENTKLQLRVGNNPGLCQYDSCQKHKFEIQHIASVAASVILIVVVSLVIWRFRRKRGGFGKVYLGTLEDDTQVAVKLLSPTSRQGYREFQPEAQLLTVIHHRNLVSLVGFCDENDVKALIYEYMDLGDLRGLLSEKNSKVLKWNERLQVAIDAARD 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1341 738 Pfam Malectin-like domain 152 481 IPR024788 -
Prci13g1341 738 PANTHER OS07G0107800 PROTEIN-RELATED 150 737 - -
Prci13g1341 738 Pfam Skp1 family, dimerisation domain 109 147 IPR016072 GO:0006511
Prci13g1341 738 Gene3D Ribonuclease Inhibitor 499 597 IPR032675 -
Prci13g1341 738 CDD BTB_POZ_SKP1 7 122 - -
Prci13g1341 738 ProSiteProfiles Protein kinase domain profile. 630 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1341 738 Gene3D Transferase(Phosphotransferase) domain 1 604 737 - -
Prci13g1341 738 SMART skp1_3 5 107 IPR001232 GO:0006511
Prci13g1341 738 Gene3D Potassium Channel Kv1.1; Chain A 4 151 IPR011333 -
Prci13g1341 738 SUPERFAMILY L domain-like 518 589 - -
Prci13g1341 738 SUPERFAMILY Protein kinase-like (PK-like) 638 737 IPR011009 -
Prci13g1341 738 SUPERFAMILY POZ domain 7 68 IPR011333 -
Prci13g1341 738 Pfam Skp1 family, tetramerisation domain 8 66 IPR016073 GO:0006511
Prci13g1341 738 Pfam Protein tyrosine and serine/threonine kinase 638 737 IPR001245 GO:0004672|GO:0006468
Prci13g1341 738 SUPERFAMILY Skp1 dimerisation domain-like 79 148 IPR036296 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1341 Prci-Chr13 12177756 12195852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1341 144 737 Receptor kinase-like Gene Family AT2G19210 37.761 4.16e-123 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1341 Malectin_like 3e-86 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1341 - - pcin:129289903 1471.06