Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1340 ATGCATAGAGACCTAAAAGCTTCCAACATTTTGCTGGATAAAACTATGGAAGCTAAGATTGCAGACTTTGGATTGTCTAGTGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTCGTCCTGTTAAAACATTTGGATACCTTGATCCTGAATTTCAAAATTCAGGAAACCTTACGAAAAGGAGTGATATTTATAGTTTTGGAATAATTCTGTTAGAGCTAATGACTGGAAAACCAGCAGCAAATAGACAACCAGACCATACCTTTAGTCTCCTTCTTCAATGGGTCACTATTAGACTTGGAAGCAAGGATATTCAGTCTATCATTGATCCAGAGTTACAAGGACAATATAGTTCTGATTCTGCTCCGAAATTTCTAGAGATAGCCATATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTAGTGGTTGAACTAAGGGAATGTCTGGCAATGGAAATAAGCTTGGAAAAGATCACTAGCCACAACACCAATGATTCAAGCAGTTCCATGGATATGATCACCTCGAAATTTGATTCGGGCTTTAGTACTCTGTCTGGTAGATAG 579 0.3817 MHRDLKASNILLDKTMEAKIADFGLSSAFANDIDSHVSTRPVKTFGYLDPEFQNSGNLTKRSDIYSFGIILLELMTGKPAANRQPDHTFSLLLQWVTIRLGSKDIQSIIDPELQGQYSSDSAPKFLEIAISCTAPSAIQRPDISQVVVELRECLAMEISLEKITSHNTNDSSSSMDMITSKFDSGFSTLSGR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1340 192 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Prci13g1340 192 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1340 192 Pfam Protein kinase domain 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1340 192 SUPERFAMILY Protein kinase-like (PK-like) 1 168 IPR011009 -
Prci13g1340 192 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1340 Prci-Chr13 12157313 12158573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1340 1 177 Receptor kinase-like Gene Family AT1G07560 46.893 2.11e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1340 Pkinase 4.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1340 - - pcin:129289902 377.096