Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1339 ATGAGGTCAAACGTATACAACAAAGGAAAACAATCCCTCTGTCTAACGGCAAGGGAACATTATTGGGATCCTGAATTATGTGGTTGTGTGCATGTGGCGTGCGTGTTTCGAGTTTCATCCCCAAATAATGGTCCTGGACTTGCCCTCTTTATAACGCTTCTCCAAGGGCAAAAAAGAGTAATCAATATTACAGTTAACGATGAAACCATCCTCAAAGAGCCTTTAGCTCTTGAATACTTGAAACCACAGACAGTTGCTGCTTTTACAAATCAAAGTGATTTCCGTTTCAGCATAAGTGCAACATCAGAATCTGACTTATCTTTCAGTTTAGATGACAACCCCGGCCTCTGTTCGAGAAATTCATGCAAAAAGCATAAGTTCGTTATTCTAGTTATTGTAGCTGTTTTAGCTTTGACTGTCATTATCTTGGTTATTTCCCTAGGAATATGGCTCTTCAAATTTAAGAAAAAGAAAGTGGATTCTACTGTTTCAACAAAGCAAGAAGCATCGGCATATTCAAGAAATCGTGCCTTTTCTTACTCCGAAATTCTTGAGATTACTGATAACTTTCAAAACTTGATTGGACAAGGGGAATTTGGAAAAGTTTATTTGGGAACTCTTAAGAATAATACTCAAGTTGCAGTCAAGTTACTTTCTCAATCATCAATGCAAGGTCATAGCGAATTTCAATCGGAGATGATAAAATTAAGTATAATCTTGCAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTAGTTTCTCTGATAGGGTACTGTGAAGAAAGTGGTGTTAGGGCATTAATTTATGAGTATATGGCTAATGGCGACCTCCACCAACACTTAGCAGTTATGAAAATCTTCCTTGTAAGAGGTTCTAATTATTTGCCCTTTTGGGTTGGAGCTTCTACAAGCTTGATTATATTAGACATTCTAAATCGGTAA 945 0.3714 MRSNVYNKGKQSLCLTAREHYWDPELCGCVHVACVFRVSSPNNGPGLALFITLLQGQKRVINITVNDETILKEPLALEYLKPQTVAAFTNQSDFRFSISATSESDLSFSLDDNPGLCSRNSCKKHKFVILVIVAVLALTVIILVISLGIWLFKFKKKKVDSTVSTKQEASAYSRNRAFSYSEILEITDNFQNLIGQGEFGKVYLGTLKNNTQVAVKLLSQSSMQGHSEFQSEMIKLSIILQVELLMVVHHRHLVSLIGYCEESGVRALIYEYMANGDLHQHLAVMKIFLVRGSNYLPFWVGASTSLIILDILNR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1339 314 SMART tyrkin_6 188 312 IPR020635 GO:0004713|GO:0006468
Prci13g1339 314 FunFam receptor-like protein kinase FERONIA 153 272 - -
Prci13g1339 314 ProSitePatterns Protein kinases ATP-binding region signature. 194 216 IPR017441 GO:0005524
Prci13g1339 314 SUPERFAMILY Protein kinase-like (PK-like) 167 287 IPR011009 -
Prci13g1339 314 Gene3D Phosphorylase Kinase; domain 1 170 272 - -
Prci13g1339 314 Pfam Protein tyrosine and serine/threonine kinase 190 283 IPR001245 GO:0004672|GO:0006468
Prci13g1339 314 PANTHER OS07G0107800 PROTEIN-RELATED 107 283 - -
Prci13g1339 314 ProSiteProfiles Protein kinase domain profile. 188 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1339 Prci-Chr13 12145911 12156422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1339 98 283 Receptor kinase-like Gene Family AT2G19230 38.743 1.21e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1339 PK_Tyr_Ser-Thr 5.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1339 - - pcin:129289901 590.882