Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1338 ATGGAGAGGACGCCACAACGAATTCTATGGTTCGTCTTGATTCAACTTTTCCTCAAGTTTGGCAACCCTGCAGTTTTTGCAGAAACAGATCATTTCATAAGCATTGACTGTGGAGCCAGCAATGCATACACTGACCCACAAACTAAAATCTCGTATCAGACAGACACAGGCTTTGTAGAAACAGGAACAAATGCTATGGTAGCACCTGATAAAAGATATAATGTAGATGACCTTTACTTTGGGAGGCAATTCCAAACGCTGAGAAGTTTCCCAGAAGGAAAAAGGAACTGCTACATCTTGAAACCAAAACAGGGCAAAAACAACAATTACCTTATAAGAGCTTCCTTCGCATATGGGAATTATGATGGCAAGAATCAGACTCCATCTTTTGACTTGTACCTCGGCGTCAATCACTGGAAAGATATTTATCCGAACAAACGTTATCGATTTGCGGAGATTATCCATACTCCCACAACTGACACCATACATGTTTGCCTTGTCAAGTCTGGCAAAGGAAAACCTTTCATTTCTACATTAGAACTACGACCTCTCAGTAATTCTATATATCGGATCCCTTTCCCTTATCAAACACTGTTAATTCTTGAGGCAAGAATCGATGTGGGCTACATTAATTCCACGACTTCAGATAACTTCAGCAGGTACATGGATGACATCTATGATCGTGTGTGGCGCTATGACGATGTTTTTAAAGGGCAAAATTGGCACCCATTCAATAGATCCGTATCTATTGATCGTGCAAGCACAAATGATTCTTATAAATTACCAGCACAAGTGTTGATATCTGCGTCCCAATCATTGAATCGCTCAGTTGCTTTAAATTTTGATACTGTTTCTGCCCTGGGTGGTACATTTGAAAAGTCATTCACCTTTTATGTCTACTTCCACTTTACTGAAATTGAGCAGCTTCGCCCTGGCCAAAAAAGAGTAATCGATATTACTGTTAATGATGAAACCATCCTCAAGGAGCCTTTAGCTCTTGAATACTTGAAACCACAGACAGTTTTTGCTGTTACAAATCGAAGCGGTATTCCTTTCAGCATAAGTGCAACATCAGAATCCGATGCTCCTCCAATCCTCAATGCCTTCGAGATTTATAGATTCGTATCACCACTAACTTCACCAACAGACCAAATCGATGTGGATGCCATTCTGGACATAAAAAAAACATACAAAATCTCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCCGAGGAATATGCATGGAAGGGACTTAGCTGCAGATATGACATCAACGATTCCAACGCAAGGATCACCTCATTAAACTTGAGCATGAGCAAGTTAAGAGGACACATATCTGCTTCATTTTCACAACTTAGCGAGTTAGAGTCACTGGATTTGTCAGGTAACGATTTATCAGGATCAATACCAGAATTTCTAGCTAAATTGACAAAGTTGAGAGCCCTTAATTTAAGTGGCAACAAGCTTAGCGGCTCAATTCCCAAAGCTCTTGAGGACAATCCAGATTTGGTAATGAGTTTAGATGGTAACCCCGGCCTCTGTTCGAGGGATTCATGCAAAAAGCATAAGTTCGTTATTCCACTTATTGTAGCTGTTTTAGGTTTGACTGTCATTATCTTGGTTGTTTCCCTAGGAATATGGATCGTCAAATTGAAAAAAAAGAAAGTGGATTCTACTGTTTCAACGAAGCAAGCAGCATCAGAATATTCAAAAAATCGTGCCTTTTCTTACTCCGAAATTCATGAGATCACTGATAACTTTCAAAACTTGATTGGACAAGGAGGATTTGGAAAAGTTTATTTTGGAACTCTGAAGAATAATACTCAAGTTGCAGTCAAGTTACTTTCTCAATCATCAATGCAAGGTCAGAGAGAATTTCGATCGGAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTGGTTTCTCTGATAGGGTACTGTGAAGGAAGTGGTGTTAGGGCATTAATTTATGAGTATATGGCTAATGGTGACCTCCACCAACACTTGTCAGGTAAGAACGCGGGTGCTTTGAAATGGAAAGACAGGCTTCAAATTGCATTGGACTCAGCACATGGACTAGATTATTTACATAATGGTTGTAAGCCAGCGATAGTGCATAGAGACCTGAAGGCTTCCAACATTTTGCTGGATAAAAATATGGAAGCTAAGATTGCTGACTTTGGATTATCTAGAGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTTGTCCTGCTGGAACATTTGGATACCTTGATCCTGAATTTCAAAATACTGGAAACCTTACAAAAGGAAGTGATATTTATAGTTTTGGAATTATTTTGTTAGAGCTAATAACTGGAAAACCAGCAGCAAAAAGACAACCAGACCATACCTTTAGTCTCCTTCTTCAATGGGTCACTATTAGACTTGGAAGCAAGGATATTCAGTCCATCATTGATCCAGAGTTACAAGGACAATATAGTTCCGATTCTGCTCGGAAATTTCTAGAGATAGCCATATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTGGTGGTTGAACTAAGGGAATGCCTGGCAATGGAAATAAGCTTGGAAAAGATCACTAGCCACAACACCAATGATTCAAGCAGTTCCATGGATATGAGCACCTCGAAATTTGATTCGGGCTTTAGTACTTTGTCTGGTAGATAG 2697 0.3964 MERTPQRILWFVLIQLFLKFGNPAVFAETDHFISIDCGASNAYTDPQTKISYQTDTGFVETGTNAMVAPDKRYNVDDLYFGRQFQTLRSFPEGKRNCYILKPKQGKNNNYLIRASFAYGNYDGKNQTPSFDLYLGVNHWKDIYPNKRYRFAEIIHTPTTDTIHVCLVKSGKGKPFISTLELRPLSNSIYRIPFPYQTLLILEARIDVGYINSTTSDNFSRYMDDIYDRVWRYDDVFKGQNWHPFNRSVSIDRASTNDSYKLPAQVLISASQSLNRSVALNFDTVSALGGTFEKSFTFYVYFHFTEIEQLRPGQKRVIDITVNDETILKEPLALEYLKPQTVFAVTNRSGIPFSISATSESDAPPILNAFEIYRFVSPLTSPTDQIDVDAILDIKKTYKISKVDWQGDPCVPEEYAWKGLSCRYDINDSNARITSLNLSMSKLRGHISASFSQLSELESLDLSGNDLSGSIPEFLAKLTKLRALNLSGNKLSGSIPKALEDNPDLVMSLDGNPGLCSRDSCKKHKFVIPLIVAVLGLTVIILVVSLGIWIVKLKKKKVDSTVSTKQAASEYSKNRAFSYSEIHEITDNFQNLIGQGGFGKVYFGTLKNNTQVAVKLLSQSSMQGQREFRSEVELLMVVHHRHLVSLIGYCEGSGVRALIYEYMANGDLHQHLSGKNAGALKWKDRLQIALDSAHGLDYLHNGCKPAIVHRDLKASNILLDKNMEAKIADFGLSRAFANDIDSHVSTCPAGTFGYLDPEFQNTGNLTKGSDIYSFGIILLELITGKPAAKRQPDHTFSLLLQWVTIRLGSKDIQSIIDPELQGQYSSDSARKFLEIAISCTAPSAIQRPDISQVVVELRECLAMEISLEKITSHNTNDSSSSMDMSTSKFDSGFSTLSGR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1338 898 Gene3D Ribonuclease Inhibitor 386 514 IPR032675 -
Prci13g1338 898 PRINTS Leucine-rich repeat signature 477 490 - -
Prci13g1338 898 PRINTS Leucine-rich repeat signature 456 469 - -
Prci13g1338 898 ProSitePatterns Protein kinases ATP-binding region signature. 592 614 IPR017441 GO:0005524
Prci13g1338 898 SUPERFAMILY Protein kinase-like (PK-like) 565 856 IPR011009 -
Prci13g1338 898 SMART serkin_6 586 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1338 898 Pfam Malectin-like domain 35 373 IPR024788 -
Prci13g1338 898 Gene3D Transferase(Phosphotransferase) domain 1 662 882 - -
Prci13g1338 898 CDD STKc_IRAK 592 856 - -
Prci13g1338 898 Gene3D Phosphorylase Kinase; domain 1 558 661 - -
Prci13g1338 898 ProSiteProfiles Leucine-rich repeat profile. 455 478 IPR001611 GO:0005515
Prci13g1338 898 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 662 869 - -
Prci13g1338 898 ProSiteProfiles Protein kinase domain profile. 586 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1338 898 MobiDBLite consensus disorder prediction 872 898 - -
Prci13g1338 898 Pfam Leucine rich repeat 431 490 IPR001611 GO:0005515
Prci13g1338 898 FunFam Leucine-rich repeat receptor-like protein kinase 561 661 - -
Prci13g1338 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Prci13g1338 898 FunFam Leucine-rich repeat receptor-like kinase 385 517 - -
Prci13g1338 898 PANTHER OS07G0107800 PROTEIN-RELATED 33 865 - -
Prci13g1338 898 Pfam Protein tyrosine and serine/threonine kinase 588 855 IPR001245 GO:0004672|GO:0006468
Prci13g1338 898 SUPERFAMILY L domain-like 415 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1338 Prci-Chr13 12105527 12116030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1338 32 892 Receptor kinase-like Gene Family AT2G19210 41.544 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1338 Malectin_like 1.9e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1338 - - pcin:129289896 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1338 13 12105527 12116030 Prci13g1338 13 12105527 12116030 ECH