Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1337 ATGGAGAGGACGCCACAACGAATTCTATGGTTCGTCTTGATTCAACTTTTCCTCAAGTTTGGCAACCCTGCAGAAACAGATCATTTCATAAGCATTGACTGTGGAGCCAGCAATGCATACACTGACCCACAAACTAAAATCTCGTATCAGACAGACACAGGCTTTGTAGAAACAGGAACAAATGCTATGGTAGCACCTGATAAAAGATATAATGTAGATGACCTTTACTTTGGGAGGCAATTCCAAACGCTGAGAAGTTTCCCAGAAGGAAAAAGGAACTGCTACATCTTGAAACCAAAACAGGGCAAAAACAACAATTACCTTATAAGAGCTTCCTTCGCATATGGGAATTATGATGGCAAGAATCAGACTCCATCTTTTGACTTGTACCTCGGCGTCAATCACTGGAAAGATATTTATCCGAACAAACGTTATCGATTTGCGGAGATTATCCATACTCCCACAACTGACACCATACATGTTTGCCTTGTCAAGTCTGGCAAAGGAAAACCTTTCATTTCTACATTAGAACTACGACCTCTCAGTAATTCTATATATCGGATCCCTTTCCCTTATCAAACACTGTTAATTCTTGAGGCAAGAATCGATGTGGGCTACATTAATTCCACGACTTCAGATAACTTCAGCAGGTACATGGATGACATCTATGATCGTGTGTGGCGCTATGACGATGTTTTTAAAGGGCAAAATTGGCACCCATTCAATAGATCCGTATCTATTGATCGTGCAAGCACAAATGATTCTTATAAATTACCAGCACAAGTGTTGATATCTGCGTCCCAATCATTGAATCGCTCAGTTGCTTTAAATTTTGATACTGTTTCTGCCCTGGGTGGTACATTTGAAAAGTCATTCACCTTTTATGTCTACTTCCACTTTACTGAAATTGAGCAGCTTCGCCCTGGCCAAAAAAGAGTAATCGATATTACTGTTAATGATGAAACCATCCTCAAGGAGCCTTTAGCTCTTGAATACTTGAAACCACAGACAGTTTTTGCTGTTACAAATCGAAGCGGTATTCCTTTCAGCATAAGTGCAACATCAGAATCCGATGCTCCTCCAATCCTCAATGCCTTCGAGATTTATAGATTCGTATCACCACTAACTTCACCAACAGACCAAATCGATGTGGATGCCATTCTGGACATAAAAAAAACATACAAAATCTCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCCGAGGAATATGCATGGAAGGGACTTAGCTGCAGATATGACATCAACGATTCCAACGCAAGGATCACCTCATTAAACTTGAGCATGAGCAAGTTAAGAGGACACATATCTGCTTCATTTTCACAACTTAGCGAGTTAGAGTCACTGGATTTGTCAGGTAACGATTTATCAGGATCAATACCAGAATTTCTAGCTAAATTGACAAAGTTGAGAGCCCTTAATTTAAGTGGCAACAAGCTTAGCGGCTCAATTCCCAAAGCTCTTGAGGACAATCCAGATTTGGTAATGAGTTTAGATGGTAACCCCGGCCTCTGTTCGAGGGATTCATGCAAAAAGCATAAGTTCGTTATTCCACTTATTGTAGCTGTTTTAGGTTTGACTGTCATTATCTTGGTTGTTTCCCTAGGAATATGGATCGTCAAATTGAAAAAAAAGAAAGTGGATTCTACTGTTTCAACGAAGCAAGCAGCATCAGAATATTCAAAAAATCGTGCCTTTTCTTACTCCGAAATTCATGAGATCACTGATAACTTTCAAAACTTGATTGGACAAGGAGGATTTGGAAAAGTTTATTTTGGAACTCTGAAGAATAATACTCAAGTTGCAGTCAAGTTACTTTCTCAATCATCAATGCAAGGTCAGAGAGAATTTCGATCGGAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTGGTTTCTCTGATAGGGTACTGTGAAGGAAGTGGTGTTAGGGCATTAATTTATGAGTATATGGCTAATGGTGACCTCCACCAACACTTGTCAGGTAAGAACGCGGGTGCTTTGAAATGGAAAGACAGGCTTCAAATTGCATTGGACTCAGCACATGGACTAGATTATTTACATAATGGTTGTAAGCCAGCGATAGTGCATAGAGACCTGAAGGCTTCCAACATTTTGCTGGATAAAAATATGGAAGCTAAGATTGCTGACTTTGGATTATCTAGAGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTTGTCCTGCTGGAACATTTGGATACCTTGATCCTGAATTTCAAAATACTGGAAACCTTACAAAAGGAAGTGATATTTATAGTTTTGGAATTATTTTGTTAGAGCTAATAACTGGAAAACCAGCAGCAAAAAGACAACCAGACCATACCTTTAGTCTCCTTCTTCAATGGGTCACTATTAGACTTGGAAGCAAGGATATTCAGTCCATCATTGATCCAGAGTTACAAGGACAATATAGTTCCGATTCTGCTCGGAAATTTCTAGAGATAGCCATATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTGGTGGTTGAACTAAGGGAATGCCTGGCAATGGAAATAAGCTTGGAAAAGATCACTAGCCACAACACCAATGATTCAAGCAGTTCCATGGATATGAGCACCTCGAAATTTGATTCGGGCTTTAGTACTTTGTCTGGTAGATAG 2688 0.3966 MERTPQRILWFVLIQLFLKFGNPAETDHFISIDCGASNAYTDPQTKISYQTDTGFVETGTNAMVAPDKRYNVDDLYFGRQFQTLRSFPEGKRNCYILKPKQGKNNNYLIRASFAYGNYDGKNQTPSFDLYLGVNHWKDIYPNKRYRFAEIIHTPTTDTIHVCLVKSGKGKPFISTLELRPLSNSIYRIPFPYQTLLILEARIDVGYINSTTSDNFSRYMDDIYDRVWRYDDVFKGQNWHPFNRSVSIDRASTNDSYKLPAQVLISASQSLNRSVALNFDTVSALGGTFEKSFTFYVYFHFTEIEQLRPGQKRVIDITVNDETILKEPLALEYLKPQTVFAVTNRSGIPFSISATSESDAPPILNAFEIYRFVSPLTSPTDQIDVDAILDIKKTYKISKVDWQGDPCVPEEYAWKGLSCRYDINDSNARITSLNLSMSKLRGHISASFSQLSELESLDLSGNDLSGSIPEFLAKLTKLRALNLSGNKLSGSIPKALEDNPDLVMSLDGNPGLCSRDSCKKHKFVIPLIVAVLGLTVIILVVSLGIWIVKLKKKKVDSTVSTKQAASEYSKNRAFSYSEIHEITDNFQNLIGQGGFGKVYFGTLKNNTQVAVKLLSQSSMQGQREFRSEVELLMVVHHRHLVSLIGYCEGSGVRALIYEYMANGDLHQHLSGKNAGALKWKDRLQIALDSAHGLDYLHNGCKPAIVHRDLKASNILLDKNMEAKIADFGLSRAFANDIDSHVSTCPAGTFGYLDPEFQNTGNLTKGSDIYSFGIILLELITGKPAAKRQPDHTFSLLLQWVTIRLGSKDIQSIIDPELQGQYSSDSARKFLEIAISCTAPSAIQRPDISQVVVELRECLAMEISLEKITSHNTNDSSSSMDMSTSKFDSGFSTLSGR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1337 895 ProSitePatterns Protein kinases ATP-binding region signature. 589 611 IPR017441 GO:0005524
Prci13g1337 895 SMART serkin_6 583 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1337 895 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Prci13g1337 895 FunFam Leucine-rich repeat receptor-like kinase 382 514 - -
Prci13g1337 895 MobiDBLite consensus disorder prediction 869 895 - -
Prci13g1337 895 ProSiteProfiles Protein kinase domain profile. 583 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1337 895 Pfam Malectin-like domain 32 370 IPR024788 -
Prci13g1337 895 Gene3D Transferase(Phosphotransferase) domain 1 659 879 - -
Prci13g1337 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Prci13g1337 895 CDD STKc_IRAK 589 853 - -
Prci13g1337 895 ProSiteProfiles Leucine-rich repeat profile. 452 475 IPR001611 GO:0005515
Prci13g1337 895 Gene3D Phosphorylase Kinase; domain 1 555 658 - -
Prci13g1337 895 PANTHER OS07G0107800 PROTEIN-RELATED 30 862 - -
Prci13g1337 895 SUPERFAMILY Protein kinase-like (PK-like) 562 853 IPR011009 -
Prci13g1337 895 Gene3D Ribonuclease Inhibitor 383 511 IPR032675 -
Prci13g1337 895 Pfam Protein tyrosine and serine/threonine kinase 585 852 IPR001245 GO:0004672|GO:0006468
Prci13g1337 895 PRINTS Leucine-rich repeat signature 453 466 - -
Prci13g1337 895 PRINTS Leucine-rich repeat signature 474 487 - -
Prci13g1337 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 659 866 - -
Prci13g1337 895 SUPERFAMILY L domain-like 412 501 - -
Prci13g1337 895 FunFam Leucine-rich repeat receptor-like protein kinase 558 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1337 Prci-Chr13 12105527 12116030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1337 8 889 Receptor kinase-like Gene Family AT2G19210 40.798 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1337 Malectin_like 1.9e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1337 - - pcin:129289896 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1337 13 12105527 12116030 Prci13g1337 13 12105527 12116030 ECH