Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1336 ATGAGTTTAGATGACAATCCCGGCCTCTGTTCGAGGGATTCATGCAAAAAGCATAAGTTCGTTATTCCACTTATTGCAGCTGTTTTAGCTTTGACTGTCATTGTCTTGGTTATTTCCCTAGGAATATGGATCTTCAAATTGAAAAAAAAGAAAGTGGATTCTACTATTTCAACAAAGCAAGAAGCATCAGAATATTCAAGAAATCGTGCCTTTTCTTACTCCGAAATTCTTGAGATCACTGATAATTTTCAAAACTTGATTGGACAAGGAGGATTTGGAAAAGTTTATCTGGGAACTCTTAAGAATAATGCTCAAGTTGCAGTCAAGTTACTTTCTCAATCATCAATGCAAGGTCATAGAGAATTTCGATCGGAGGTAGAACTTCTTATGGTCGTTCATCATAGACACCTAGTTTCACTGATAGGGTACTGTGAAGGAAGTGGGGTCACAGCATTAATTTATGAGTATACGGCTAATGGTGACCTCCACCAACACTTATCAGGTAAGAATCCGGGTGCTTTGAAATGGAAGGACCGGCTTCAAATTGCATTGGACTCAGCACATGGATTGGATTATTTGCATAATGGTTGTAAGTCGGTGATAGTGCATAGAGATCTAAAAGCTTCTAACATTCTGGATAAACATATGGAAGCTAAGATTGCTGATTTCGAATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTCGTCCTGCTGGAATATTTGGATATCTTGATCCTGAATTTCAAAATACTGGAAACCTTACGAAAGGAAGCGATATTTATAGTTTTGGAATAATTTTTTTGATTACTGGAAAACCAGCAGCAAAAAGACAACCAGTCCATACCTTTAGTCTCCTACTTCAATGGGTCACCCTTAGACTTGGAAGCAAGGATATTCAGTCCATCATTGATCCAGGGTTACAAGGACAATATAGTGTTGATTCTGCTTGGAAATTTCTAGAGATAGCCATATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTGGTGGTTGAACTAAGGGAATGCCTGGCAATGGAAATAAGCTTGGAAAAGATCACTAGCCACAACACCAATGATTCAAGCAGTTCCATGGATATGAGCACCTCGAAATTTGATTCGGGCTTTAGTACTTTGTCTGGTAGATAG 1173 0.3853 MSLDDNPGLCSRDSCKKHKFVIPLIAAVLALTVIVLVISLGIWIFKLKKKKVDSTISTKQEASEYSRNRAFSYSEILEITDNFQNLIGQGGFGKVYLGTLKNNAQVAVKLLSQSSMQGHREFRSEVELLMVVHHRHLVSLIGYCEGSGVTALIYEYTANGDLHQHLSGKNPGALKWKDRLQIALDSAHGLDYLHNGCKSVIVHRDLKASNIXLDKHMEAKIADFELSRAFANDIDSHVSTRPAGIFGYLDPEFQNTGNLTKGSDIYSFGIIFLXITGKPAAKRQPVHTFSLLLQWVTLRLGSKDIQSIIDPGLQGQYSVDSAWKFLEIAISCTAPSAIQRPDISQVVVELRECLAMEISLEKITSHNTNDSSSSMDMSTSKFDSGFSTLSGR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1336 392 ProSiteProfiles Protein kinase domain profile. 81 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1336 392 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Prci13g1336 392 SUPERFAMILY Protein kinase-like (PK-like) 59 350 IPR011009 -
Prci13g1336 392 FunFam Leucine-rich repeat receptor-like protein kinase 54 156 - -
Prci13g1336 392 Gene3D Phosphorylase Kinase; domain 1 53 156 - -
Prci13g1336 392 PANTHER OS07G0107800 PROTEIN-RELATED 7 360 - -
Prci13g1336 392 SMART serkin_6 81 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1336 392 PIRSF TyrPK_CSF1-R 321 386 - -
Prci13g1336 392 PIRSF TyrPK_CSF1-R 8 172 - -
Prci13g1336 392 PIRSF TyrPK_CSF1-R 163 276 - -
Prci13g1336 392 Gene3D Transferase(Phosphotransferase) domain 1 158 377 - -
Prci13g1336 392 FunFam Os07g0541700 protein 160 245 - -
Prci13g1336 392 Pfam Protein tyrosine and serine/threonine kinase 83 348 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1336 Prci-Chr13 12089097 12098009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1336 1 387 Receptor kinase-like Gene Family AT1G51850 44.039 2.84e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1336 PK_Tyr_Ser-Thr 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1336 - - pcin:129290665 732.635