Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1333 ATGGAAAGGGCACTAAAGTTGAACCTGTCCTTAGTCTGGTGCCATGTTTTCATCCTACTTTTCCTTATTGGCAATACTATAGGAGATGGAAGGAAACTCATCACCAAAGTGGATAGGAACCCTGGATTCATAAGCATTGATTGTGGATCGCCAATTGATTACTTTGATGAAGAAACTAATATTTGGTATCAGACCGACAAAAACTTTATTGACACTGGTAAAAATGCTATGGTCCTCCCAAGCTCCAACACTGATTATCCTTATTTTGGGGGACTTTTGAACACGTTGAGAAGTTTCCCAAATGGAACAAGGAACTGCTATACTCTCAAACCAAAACAAGGCAAGCACCATACTTATCTCATCAGAGCTTACTTTGCATATGGAAATTACGACGGCAACAACCAAACTCCATCCTTTGACTTGTATATTGGCGTCAATCGTTGGGATACTTTTAACTGGGGTCGAAAAGATTATTACATAACCGAGACCATTCATACTCCAACAACTGACACCATACATGTGTGCCTTGTAAAAACTGTCATCGGAGTACCTTTCATTTCTGCATTGGAACTTCGTCCTCTCAGCAATTCCATCTATCAAACTCCTTCGCCTTCTCAATCACTTTTAATCAGTCAAGGAAGATTTGATGTTGCCTCCACTAGCTTAGTCTGGCACAGCAGGTACAAAGATGACATTTACGATCGTCTGTGGCGCTATATGAATTCATCATATCAGATCAATGGATCTGTGGATATTGGTCCTGCAAGCATGAACAGTTCTTATAAATTACCAGCAGAAGTACTGAAATCGGCAGCCCGATCGTTTAATCTCTCCTATGGATTAAATTTTGAGTATAACTCTATTTGGAAAAACCTTGACAAGTCTTCCCAGTATTATGTCTACTTTCACTTTCTTGAAATTCAGAAACTTCCTCCTGGCCAAAAAAGAATAATCAATATTGATGTTGATGGTGAAAACATCCTCTCCCAGCCAATAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTAAAAATGCAACTCCTGGTTATGTACGCTTTAACATCAGTGCAGCCTCAAAATCTGACGCGCCTCCAATCCTCAATGCTTTTGAGGTTTATAAGTTCATTTCTCCGCTTCCTTCCCCAACTGACAAAACAGATGTGGTTATCAGTTTTTCTACAAATGAAGAATCCTTCCAAAAAAATCGAGCTGTTTCTTACTCAAGAGTTCTTAGAATCACTAATAACTTGCAAAACTTAATTGGAGAAGGAGGATTTGGTAAGGTTTATCATGGCACTCTGAAGAATAATACTCAAGTTGCCGTGAAGTTGCTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCTGAGGTTGAACTTTTAATGGTTGTCCATCATAGACACTTGGTTTCTCTAATTGGATATTGTGAAGAAGGGGGTGTGAGAGCACTGATTTATGAATATATGGCTAACGGCAATCTCCAACAACATTTATCAGAGGATAACCCTGGTGTTTTGAAATGGAATGAGAGACTTCAAATTGCTTTGGATGCAGCACACGGATTAGACTATTTGCATAATGGTTGTAAGCCACCAATAGTCCATAGAGACTTAAAGACCTCAAATATTTTACTAAATGAAAACATGCAAGCCAAGATTTCTGATTTTGGACTGTCTCGAGCATTTGCAAATGACATTGACACTCATGTATCAACTCGTCCTGCTGGTACATTGGGTTACCTCGATCCTGAATTCCAAAGCTCTGGAAACTTAAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTGCTTGAGCTAATCACTGGTCAACCGGCAATAAGAAGAAAACATGGAGCCATTTGTCACATTCTTCATTGGGTTACTCCCCAACTTGAAATGGGAGATATCCAATCCATCATAGATCCAAGGTTACAAGGAAATTACAACACTAGTTCAGTTTGGAAACTTTTAGAGATAGCCATGTCTTGCACTCCACCGTCTGCAATTCAAAGGCCTGACATAAGCCATATAGTGGCGGAATTAAAAGAATGTCTGGCTCTTGAAGTAAACATGGAAAGGTCTAAGAGCAAGAGGTCAAGCATTTCCTTAGATTGGAGTTCTTTTAGGGTTGATTCTTCTGGGTTTATTCCACAAGCTAGGTAG 2175 0.3913 MERALKLNLSLVWCHVFILLFLIGNTIGDGRKLITKVDRNPGFISIDCGSPIDYFDEETNIWYQTDKNFIDTGKNAMVLPSSNTDYPYFGGLLNTLRSFPNGTRNCYTLKPKQGKHHTYLIRAYFAYGNYDGNNQTPSFDLYIGVNRWDTFNWGRKDYYITETIHTPTTDTIHVCLVKTVIGVPFISALELRPLSNSIYQTPSPSQSLLISQGRFDVASTSLVWHSRYKDDIYDRLWRYMNSSYQINGSVDIGPASMNSSYKLPAEVLKSAARSFNLSYGLNFEYNSIWKNLDKSSQYYVYFHFLEIQKLPPGQKRIINIDVDGENILSQPIILEYLKPQTIVPKNATPGYVRFNISAASKSDAPPILNAFEVYKFISPLPSPTDKTDVVISFSTNEESFQKNRAVSYSRVLRITNNLQNLIGEGGFGKVYHGTLKNNTQVAVKLLSQSSMQGFREFRSEVELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLQQHLSEDNPGVLKWNERLQIALDAAHGLDYLHNGCKPPIVHRDLKTSNILLNENMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRRKHGAICHILHWVTPQLEMGDIQSIIDPRLQGNYNTSSVWKLLEIAMSCTPPSAIQRPDISHIVAELKECLALEVNMERSKSKRSSISLDWSSFRVDSSGFIPQAR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1333 724 SUPERFAMILY Protein kinase-like (PK-like) 397 685 IPR011009 -
Prci13g1333 724 Gene3D Phosphorylase Kinase; domain 1 422 492 - -
Prci13g1333 724 CDD STKc_IRAK 422 687 - -
Prci13g1333 724 Pfam Protein tyrosine and serine/threonine kinase 418 685 IPR001245 GO:0004672|GO:0006468
Prci13g1333 724 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 492 698 - -
Prci13g1333 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Prci13g1333 724 ProSiteProfiles Protein kinase domain profile. 416 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1333 724 PANTHER OS07G0107800 PROTEIN-RELATED 401 693 - -
Prci13g1333 724 SMART serkin_6 416 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1333 724 Pfam Malectin-like domain 46 375 IPR024788 -
Prci13g1333 724 FunFam Leucine-rich repeat receptor-like protein kinase 394 491 - -
Prci13g1333 724 ProSitePatterns Protein kinases ATP-binding region signature. 422 444 IPR017441 GO:0005524
Prci13g1333 724 Gene3D - 219 376 - -
Prci13g1333 724 Gene3D Transferase(Phosphotransferase) domain 1 493 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1333 Prci-Chr13 12053357 12060465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1333 378 724 Receptor kinase-like Gene Family AT1G51860 51.705 4.95e-114 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1333 Malectin_like 1.8e-82 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1333 - - pcin:129289896 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1333 13 12053357 12060465 Prci13g1333 13 12053357 12060465 ECH