Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1332 ATGAAATCTAAAGTTTCTGGAGATGGAAGGAAACTCATCACCAAAGTGGATAGGAACCCTGGATTCATAAGCATTGATTGTGGATCGCCAATTGATTACTTTGATGAAGAAACTAATATTTGGTATCAGACCGACAAAAACTTTATTGACACTGGTAAAAATGCTATGGTCCTCCCAAGCTCCAACACTGATTATCCTTATTTTGGGGGACTTTTGAACACGTTGAGAAGTTTCCCAAATGGAACAAGGAACTGCTATACTCTCAAACCAAAACAAGGCAAGCACCATACTTATCTCATCAGAGCTTACTTTGCATATGGAAATTACGACGGCAACAACCAAACTCCATCCTTTGACTTGTATATTGGCGTCAATCGTTGGGATACTTTTAACTGGGGTCGAAAAGATTATTACATAACCGAGACCATTCATACTCCAACAACTGACACCATACATGTGTGCCTTGTAAAAACTGTCATCGGAGTACCTTTCATTTCTGCATTGGAACTTCGTCCTCTCAGCAATTCCATCTATCAAACTCCTTCGCCTTCTCAATCACTTTTAATCAGTCAAGGAAGATTTGATGTTGCCTCCACTAGCTTAGTCTGGCACAGCAGGTACAAAGATGACATTTACGATCGTCTGTGGCGCTATATGAATTCATCATATCAGATCAATGGATCTGTGGATATTGGTCCTGCAAGCATGAACAGTTCTTATAAATTACCAGCAGAAGTACTGAAATCGGCAGCCCGATCGTTTAATCTCTCCTATGGATTAAATTTTGAGTATAACTCTATTTGGAAAAACCTTGACAAGTCTTCCCAGTATTATGTCTACTTTCACTTTCTTGAAATTCAGAAACTTCCTCCTGGCCAAAAAAGAATAATCAATATTGATGTTGATGGTGAAAACATCCTCTCCCAGCCAATAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTAAAAATGCAACTCCTGGTTATGTACGCTTTAACATCAGTGCAGCCTCAAAATCTGACGCGCCTCCAATCCTCAATGCTTTTGAGGTTTATAAGTTCATTTCTCCGCTTCCTTCCCCAACTGACAAAACAGATGTGGATGCTATAATGGGCGTCAAAAACACATACAAGATCTTCAATTTAGACTGGCAAGGAGATCCATGTGTTCCAGAACTTGCTTGGGATGGACTAAACTGTAGTTCTAGTTTCAATGGCTACAACGCAAGGATCACCTCAGTGAACTTAAGTGCGACAAAATTGACAGGGCAAATAGCTACTTCATTTTCACAACTTTCAGAGCTGGAGTCACTAGATTTGTCATTTAATAACTTGTCAGGATCAGTACCAGAATTTTTAGCAACATTGCCAAAGCTAAGAGTCCTTAATTTGAGTGGTAACAAGCTCACAGGTTCAATTCCAAAGGCTATTATGGAAAAGTCATATGTAACTTTGCAATTGAGTTTGGCGGATAATCCTGGTCTTTGTCTGGAGGATTCGTGCAAAAGGTCAAAGTTAGTTATTCCACTTGTTGCTTCAGTTTCTGCTTTGATTGTAATCTTCTTGGTTTCTTTAGGAATATGGATCTTGAAAACCAAGAAATTAAAAGTGGTTATCAGTTTTTCTACAAATGAAGAATCCTTCCAAAAAAATCGAGCTGTTTCTTACTCAAGAGTTCTTAGAATCACTAATAACTTGCAAAACTTAATTGGAGAAGGAGGATTTGGTAAGGTTTATCATGGCACTCTGAAGAATAATACTCAAGTTGCCGTGAAGTTGCTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCTGAGGTTGAACTTTTAATGGTTGTCCATCATAGACACTTGGTTTCTCTAATTGGATATTGTGAAGAAGGGGGTGTGAGAGCACTGATTTATGAATATATGGCTAACGGCAATCTCCAACAACATTTATCAGAGGATAACCCTGGTGTTTTGAAATGGAATGAGAGACTTCAAATTGCTTTGGATGCAGCACACGGATTAGACTATTTGCATAATGGTTGTAAGCCACCAATAGTCCATAGAGACTTAAAGACCTCAAATATTTTACTAAATGAAAACATGCAAGCCAAGATTTCTGATTTTGGACTGTCTCGAGCATTTGCAAATGACATTGACACTCATGTATCAACTCGTCCTGCTGGTACATTGGGTTACCTCGATCCTGAATTCCAAAGCTCTGGAAACTTAAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTGCTTGAGCTAATCACTGGTCAACCGGCAATAAGAAGAAAACATGGAGCCATTTGTCACATTCTTCATTGGGTTACTCCCCAACTTGAAATGGGAGATATCCAATCCATCATAGATCCAAGGTTACAAGGAAATTACAACACTAGTTCAGTTTGGAAACTTTTAGAGATAGCCATGTCTTGCACTCCACCGTCTGCAATTCAAAGGCCTGACATAAGCCATATAGTGGCGGAATTAAAAGAATGTCTGGCTCTTGAAGTAAACATGGAAAGGTCTAAGAGCAAGAGGTCAAGCATTTCCTTAGATTGGAGTTCTTTTAGGGTTGATTCTTCTGGGTTTATTCCACAAGCTAGGTAG 2622 0.3879 MKSKVSGDGRKLITKVDRNPGFISIDCGSPIDYFDEETNIWYQTDKNFIDTGKNAMVLPSSNTDYPYFGGLLNTLRSFPNGTRNCYTLKPKQGKHHTYLIRAYFAYGNYDGNNQTPSFDLYIGVNRWDTFNWGRKDYYITETIHTPTTDTIHVCLVKTVIGVPFISALELRPLSNSIYQTPSPSQSLLISQGRFDVASTSLVWHSRYKDDIYDRLWRYMNSSYQINGSVDIGPASMNSSYKLPAEVLKSAARSFNLSYGLNFEYNSIWKNLDKSSQYYVYFHFLEIQKLPPGQKRIINIDVDGENILSQPIILEYLKPQTIVPKNATPGYVRFNISAASKSDAPPILNAFEVYKFISPLPSPTDKTDVDAIMGVKNTYKIFNLDWQGDPCVPELAWDGLNCSSSFNGYNARITSVNLSATKLTGQIATSFSQLSELESLDLSFNNLSGSVPEFLATLPKLRVLNLSGNKLTGSIPKAIMEKSYVTLQLSLADNPGLCLEDSCKRSKLVIPLVASVSALIVIFLVSLGIWILKTKKLKVVISFSTNEESFQKNRAVSYSRVLRITNNLQNLIGEGGFGKVYHGTLKNNTQVAVKLLSQSSMQGFREFRSEVELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLQQHLSEDNPGVLKWNERLQIALDAAHGLDYLHNGCKPPIVHRDLKTSNILLNENMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRRKHGAICHILHWVTPQLEMGDIQSIIDPRLQGNYNTSSVWKLLEIAMSCTPPSAIQRPDISHIVAELKECLALEVNMERSKSKRSSISLDWSSFRVDSSGFIPQAR 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1332 873 SUPERFAMILY Protein kinase-like (PK-like) 546 834 IPR011009 -
Prci13g1332 873 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 641 847 - -
Prci13g1332 873 Pfam Malectin-like domain 25 354 IPR024788 -
Prci13g1332 873 PRINTS Leucine-rich repeat signature 457 470 - -
Prci13g1332 873 PRINTS Leucine-rich repeat signature 436 449 - -
Prci13g1332 873 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Prci13g1332 873 ProSitePatterns Protein kinases ATP-binding region signature. 571 593 IPR017441 GO:0005524
Prci13g1332 873 Gene3D Ribonuclease Inhibitor 371 489 IPR032675 -
Prci13g1332 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Prci13g1332 873 Pfam Protein tyrosine and serine/threonine kinase 567 834 IPR001245 GO:0004672|GO:0006468
Prci13g1332 873 PANTHER OS07G0107800 PROTEIN-RELATED 23 844 - -
Prci13g1332 873 CDD STKc_IRAK 571 836 - -
Prci13g1332 873 Gene3D Transferase(Phosphotransferase) domain 1 642 859 - -
Prci13g1332 873 FunFam Leucine-rich repeat receptor-like kinase 366 497 - -
Prci13g1332 873 ProSiteProfiles Protein kinase domain profile. 565 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1332 873 Gene3D Phosphorylase Kinase; domain 1 571 641 - -
Prci13g1332 873 Gene3D - 198 355 - -
Prci13g1332 873 FunFam Leucine-rich repeat receptor-like protein kinase 543 640 - -
Prci13g1332 873 SMART serkin_6 565 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1332 873 SUPERFAMILY L domain-like 403 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1332 Prci-Chr13 12053356 12060465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1332 21 873 Receptor kinase-like Gene Family AT2G19230 44.571 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1332 Malectin_like 2.8e-82 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1332 - - pcin:129289896 1004.2