Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1331 ATGGAAAGGGCACTAAAGTTGAACCTGTCCTTAGTCTGGTGCCATGTTTTCATCCTACTTTTCCTTATTGGCAATACTATAGGAGATGGAAGGAAACTCATCACCAAAGTGGATAGGAACCCTGGATTCATAAGCATTGATTGTGGATCGCCAATTGATTACTTTGATGAAGAAACTAATATTTGGTATCAGACCGACAAAAACTTTATTGACACTGGTAAAAATGCTATGGTCCTCCCAAGCTCCAACACTGATTATCCTTATTTTGGGGGACTTTTGAACACGTTGAGAAGTTTCCCAAATGGAACAAGGAACTGCTATACTCTCAAACCAAAACAAGGCAAGCACCATACTTATCTCATCAGAGCTTACTTTGCATATGGAAATTACGACGGCAACAACCAAACTCCATCCTTTGACTTGTATATTGGCGTCAATCGTTGGGATACTTTTAACTGGGGTCGAAAAGATTATTACATAACCGAGACCATTCATACTCCAACAACTGACACCATACATGTGTGCCTTGTAAAAACTGTCATCGGAGTACCTTTCATTTCTGCATTGGAACTTCGTCCTCTCAGCAATTCCATCTATCAAACTCCTTCGCCTTCTCAATCACTTTTAATCAGTCAAGGAAGATTTGATGTTGCCTCCACTAGCTTAGTCTGGCACAGCAGGTACAAAGATGACATTTACGATCGTCTGTGGCGCTATATGAATTCATCATATCAGATCAATGGATCTGTGGATATTGGTCCTGCAAGCATGAACAGTTCTTATAAATTACCAGCAGAAGTACTGAAATCGGCAGCCCGATCGTTTAATCTCTCCTATGGATTAAATTTTGAGTATAACTCTATTTGGAAAAACCTTGACAAGTCTTCCCAGTATTATGTCTACTTTCACTTTCTTGAAATTCAGAAACTTCCTCCTGGCCAAAAAAGAATAATCAATATTGATGTTGATGGTGAAAACATCCTCTCCCAGCCAATAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTAAAAATGCAACTCCTGGTTATGTACGCTTTAACATCAGTGCAGCCTCAAAATCTGACGCGCCTCCAATCCTCAATGCTTTTGAGGTTTATAAGTTCATTTCTCCGCTTCCTTCCCCAACTGACAAAACAGATGTGGATGCTATAATGGGCGTCAAAAACACATACAAGATCTTCAATTTAGACTGGCAAGGAGATCCATGTGTTCCAGAACTTGCTTGGGATGGACTAAACTGTAGTTCTAGTTTCAATGGCTACAACGCAAGGATCACCTCAGTGAACTTAAGTGCGACAAAATTGACAGGGCAAATAGCTACTTCATTTTCACAACTTTCAGAGCTGGAGTCACTAGATTTGTCATTTAATAACTTGTCAGGATCAGTACCAGAATTTTTAGCAACATTGCCAAAGCTAAGAGTCCTTAATTTGAGTGGTAACAAGCTCACAGGTTCAATTCCAAAGGCTATTATGGAAAAGTCATATGTAACTTTGCAATTGAGTTTGGCGGATAATCCTGGTCTTTGTCTGGAGGATTCGTGCAAAAGGTCAAAGTTAGTTATTCCACTTGTTGCTTCAGTTTCTGCTTTGATTGTAATCTTCTTGGTTTCTTTAGGAATATGGATCTTGAAAACCAAGAAATTAAAAGTGGTTATCAGTTTTTCTACAAATGAAGAATCCTTCCAAAAAAATCGAGCTGTTTCTTACTCAAGAGTTCTTAGAATCACTAATAACTTGCAAAACTTAATTGGAGAAGGAGGATTTGGTAAGGTTTATCATGGCACTCTGAAGAATAATACTCAAGTTGCCGTGAAGTTGCTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCTGAGGTTGAACTTTTAATGGTTGTCCATCATAGACACTTGGTTTCTCTAATTGGATATTGTGAAGAAGGGGGTGTGAGAGCACTGATTTATGAATATATGGCTAACGGCAATCTCCAACAACATTTATCAGAGGATAACCCTGGTGTTTTGAAATGGAATGAGAGACTTCAAATTGCTTTGGATGCAGCACACGGATTAGACTATTTGCATAATGGTTGTAAGCCACCAATAGTCCATAGAGACTTAAAGACCTCAAATATTTTACTAAATGAAAACATGCAAGCCAAGATTTCTGATTTTGGACTGTCTCGAGCATTTGCAAATGACATTGACACTCATGTATCAACTCGTCCTGCTGGTACATTGGGTTACCTCGATCCTGAATTCCAAAGCTCTGGAAACTTAAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTGCTTGAGCTAATCACTGGTCAACCGGCAATAAGAAGAAAACATGGAGCCATTTGTCACATTCTTCATTGGGTTACTCCCCAACTTGAAATGGGAGATATCCAATCCATCATAGATCCAAGGTTACAAGGAAATTACAACACTAGTTCAGTTTGGAAACTTTTAGAGATAGCCATGTCTTGCACTCCACCGTCTGCAATTCAAAGGCCTGACATAAGCCATATAGTGGCGGAATTAAAAGAATGTCTGGCTCTTGAAGTAAACATGGAAAGGTCTAAGAGCAAGAGGTCAAGCATTTCCTTAGATTGGAGTTCTTTTAGGGTTGATTCTTCTGGGTTTATTCCACAAGCTAGGTAG 2685 0.3892 MERALKLNLSLVWCHVFILLFLIGNTIGDGRKLITKVDRNPGFISIDCGSPIDYFDEETNIWYQTDKNFIDTGKNAMVLPSSNTDYPYFGGLLNTLRSFPNGTRNCYTLKPKQGKHHTYLIRAYFAYGNYDGNNQTPSFDLYIGVNRWDTFNWGRKDYYITETIHTPTTDTIHVCLVKTVIGVPFISALELRPLSNSIYQTPSPSQSLLISQGRFDVASTSLVWHSRYKDDIYDRLWRYMNSSYQINGSVDIGPASMNSSYKLPAEVLKSAARSFNLSYGLNFEYNSIWKNLDKSSQYYVYFHFLEIQKLPPGQKRIINIDVDGENILSQPIILEYLKPQTIVPKNATPGYVRFNISAASKSDAPPILNAFEVYKFISPLPSPTDKTDVDAIMGVKNTYKIFNLDWQGDPCVPELAWDGLNCSSSFNGYNARITSVNLSATKLTGQIATSFSQLSELESLDLSFNNLSGSVPEFLATLPKLRVLNLSGNKLTGSIPKAIMEKSYVTLQLSLADNPGLCLEDSCKRSKLVIPLVASVSALIVIFLVSLGIWILKTKKLKVVISFSTNEESFQKNRAVSYSRVLRITNNLQNLIGEGGFGKVYHGTLKNNTQVAVKLLSQSSMQGFREFRSEVELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLQQHLSEDNPGVLKWNERLQIALDAAHGLDYLHNGCKPPIVHRDLKTSNILLNENMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRRKHGAICHILHWVTPQLEMGDIQSIIDPRLQGNYNTSSVWKLLEIAMSCTPPSAIQRPDISHIVAELKECLALEVNMERSKSKRSSISLDWSSFRVDSSGFIPQAR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1331 894 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Prci13g1331 894 ProSitePatterns Protein kinases ATP-binding region signature. 592 614 IPR017441 GO:0005524
Prci13g1331 894 Gene3D - 219 376 - -
Prci13g1331 894 CDD STKc_IRAK 592 857 - -
Prci13g1331 894 Gene3D Phosphorylase Kinase; domain 1 592 662 - -
Prci13g1331 894 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 662 868 - -
Prci13g1331 894 ProSiteProfiles Protein kinase domain profile. 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1331 894 SUPERFAMILY L domain-like 424 528 - -
Prci13g1331 894 Pfam Protein tyrosine and serine/threonine kinase 588 855 IPR001245 GO:0004672|GO:0006468
Prci13g1331 894 Gene3D Ribonuclease Inhibitor 392 510 IPR032675 -
Prci13g1331 894 FunFam Leucine-rich repeat receptor-like kinase 387 518 - -
Prci13g1331 894 SUPERFAMILY Protein kinase-like (PK-like) 567 855 IPR011009 -
Prci13g1331 894 FunFam Leucine-rich repeat receptor-like protein kinase 564 661 - -
Prci13g1331 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Prci13g1331 894 Pfam Malectin-like domain 46 375 IPR024788 -
Prci13g1331 894 PANTHER OS07G0107800 PROTEIN-RELATED 44 865 - -
Prci13g1331 894 PRINTS Leucine-rich repeat signature 457 470 - -
Prci13g1331 894 PRINTS Leucine-rich repeat signature 478 491 - -
Prci13g1331 894 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
Prci13g1331 894 SMART serkin_6 586 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1331 Prci-Chr13 12053356 12060465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1331 42 894 Receptor kinase-like Gene Family AT2G19230 44.571 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1331 Malectin_like 3e-82 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1331 - - pcin:129289896 1004.2