Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g1330 | ATGGAAAGGGCACTAAAGTTGAACCTGTCCTTAGTCTGGTGCCATGTTTTCATCCTACTTTTCCTTATTGGCAATACTATAGGAGATGGAAGGAAACTCATCACCAAAGTGGATAGGAACCCTGGATTCATAAGCATTGATTGTGGATCGCCAATTGATTACTTTGATGAAGAAACTAATATTTGGTATCAGACCGACAAAAACTTTATTGACACTGGTAAAAATGCTATGGTCCTCCCAAGCTCCAACACTGATTATCCTTATTTTGGGGGACTTTTGAACACGTTGAGAAGTTTCCCAAATGGAACAAGGAACTGCTATACTCTCAAACCAAAACAAGGCAAGCACCATACTTATCTCATCAGAGCTTACTTTGCATATGGAAATTACGACGGCAACAACCAAACTCCATCCTTTGACTTGTATATTGGCGTCAATCGTTGGGATACTTTTAACTGGGGTCGAAAAGATTATTACATAACCGAGACCATTCATACTCCAACAACTGACACCATACATGTGTGCCTTGTAAAAACTGTCATCGGAGTACCTTTCATTTCTGCATTGGAACTTCGTCCTCTCAGCAATTCCATCTATCAAACTCCTTCGCCTTCTCAATCACTTTTAATCAGTCAAGGAAGATTTGATGTTGCCTCCACTAGCTTAGTCTGGCACAGCAGGTACAAAGATGACATTTACGATCGTCTGTGGCGCTATATGAATTCATCATATCAGATCAATGGATCTGTGGATATTGGTCCTGCAAGCATGAACAGTTCTTATAAATTACCAGCAGAAGTACTGAAATCGGCAGCCCGATCGTTTAATCTCTCCTATGGATTAAATTTTGAGTATAACTCTATTTGGAAAAACCTTGACAAGTCTTCCCAGTATTATGTCTACTTTCACTTTCTTGAAATTCAGAAACTTCCTCCTGGCCAAAAAAGAATAATCAATATTGATGTTGATGGTGAAAACATCCTCTCCCAGCCAATAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTAAAAATGCAACTCCTGGTTATGTACGCTTTAACATCAGTGCAGCCTCAAAATCTGACGCGCCTCCAATCCTCAATGCTTTTGAGGTTTATAAGTTCATTTCTCCGCTTCCTTCCCCAACTGACAAAACAGATGTGGATGCTATAATGGGCGTCAAAAACACATACAAGATCTTCAATTTAGACTGGCAAGGAGATCCATGTGTTCCAGAACTTGCTTGGGATGGACTAAACTGTAGTTCTAGTTTCAATGGCTACAACGCAAGGATCACCTCAGTGAACTTAAGTGCGACAAAATTGACAGGGCAAATAGCTACTTCATTTTCACAACTTTCAGAGCTGGAGTCACTAGATTTGTCATTTAATAACTTGTCAGGATCAGTACCAGAATTTTTAGCAACATTGCCAAAGCTAAGAGTCCTTAATTTGAGTGGTAACAAGCTCACAGGTTCAATTCCAAAGGCTATTATGGAAAAGTCATATGTAACTTTGCAATTGAGTTTGGCGGATAATCCTGGTCTTTGTCTGGAGGATTCGTGCAAAAGGTCAAAGTTAGTTATTCCACTTGTTGCTTCAGTTTCTGCTTTGATTGTAATCTTCTTGGTTTCTTTAGGAATATGGATCTTGAAAACCAAGAAATTAAAAGTGGTTATCAGTTTTTCTACAAATGAAGAATCCTTCCAAAAAAATCGAGCTGTTTCTTACTCAAGAGTTCTTAGAATCACTAATAACTTGCAAAACTTAATTGGAGAAGGAGGATTTGGTAAGGTTTATCATGGCACTCTGAAGAATAATACTCAAGTTGCCGTGAAGTTGCTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCTGAGGTTGAACTTTTAATGGTTGTCCATCATAGACACTTGGTTTCTCTAATTGGATATTGTGAAGAAGGGGGTGTGAGAGCACTGATTTATGAATATATGGCTAACGGCAATCTCCAACAACATTTATCAGAGGATAACCCTGGTGTTTTGAAATGGAATGAGAGACTTCAAATTGCTTTGGATGCAGCACACGATTATGACACATTTGGCTACTCAATGGAAATGCAGGATTAG | 2121 | 0.388 | MERALKLNLSLVWCHVFILLFLIGNTIGDGRKLITKVDRNPGFISIDCGSPIDYFDEETNIWYQTDKNFIDTGKNAMVLPSSNTDYPYFGGLLNTLRSFPNGTRNCYTLKPKQGKHHTYLIRAYFAYGNYDGNNQTPSFDLYIGVNRWDTFNWGRKDYYITETIHTPTTDTIHVCLVKTVIGVPFISALELRPLSNSIYQTPSPSQSLLISQGRFDVASTSLVWHSRYKDDIYDRLWRYMNSSYQINGSVDIGPASMNSSYKLPAEVLKSAARSFNLSYGLNFEYNSIWKNLDKSSQYYVYFHFLEIQKLPPGQKRIINIDVDGENILSQPIILEYLKPQTIVPKNATPGYVRFNISAASKSDAPPILNAFEVYKFISPLPSPTDKTDVDAIMGVKNTYKIFNLDWQGDPCVPELAWDGLNCSSSFNGYNARITSVNLSATKLTGQIATSFSQLSELESLDLSFNNLSGSVPEFLATLPKLRVLNLSGNKLTGSIPKAIMEKSYVTLQLSLADNPGLCLEDSCKRSKLVIPLVASVSALIVIFLVSLGIWILKTKKLKVVISFSTNEESFQKNRAVSYSRVLRITNNLQNLIGEGGFGKVYHGTLKNNTQVAVKLLSQSSMQGFREFRSEVELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLQQHLSEDNPGVLKWNERLQIALDAAHDYDTFGYSMEMQD | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g1330 | 706 | FunFam | Leucine-rich repeat receptor-like protein kinase | 564 | 661 | - | - | |
Prci13g1330 | 706 | ProSitePatterns | Protein kinases ATP-binding region signature. | 592 | 614 | IPR017441 | GO:0005524 | |
Prci13g1330 | 706 | Pfam | Leucine rich repeat | 432 | 491 | IPR001611 | GO:0005515 | |
Prci13g1330 | 706 | PANTHER | OS07G0107800 PROTEIN-RELATED | 44 | 693 | - | - | |
Prci13g1330 | 706 | Gene3D | Transferase(Phosphotransferase) domain 1 | 567 | 694 | - | - | |
Prci13g1330 | 706 | SMART | tyrkin_6 | 586 | 706 | IPR020635 | GO:0004713|GO:0006468 | |
Prci13g1330 | 706 | PRINTS | Leucine-rich repeat signature | 457 | 470 | - | - | |
Prci13g1330 | 706 | PRINTS | Leucine-rich repeat signature | 478 | 491 | - | - | |
Prci13g1330 | 706 | SUPERFAMILY | Protein kinase-like (PK-like) | 567 | 692 | IPR011009 | - | |
Prci13g1330 | 706 | Gene3D | - | 219 | 376 | - | - | |
Prci13g1330 | 706 | Pfam | Protein tyrosine and serine/threonine kinase | 588 | 693 | IPR001245 | GO:0004672|GO:0006468 | |
Prci13g1330 | 706 | Gene3D | Ribonuclease Inhibitor | 392 | 510 | IPR032675 | - | |
Prci13g1330 | 706 | SUPERFAMILY | L domain-like | 423 | 528 | - | - | |
Prci13g1330 | 706 | ProSiteProfiles | Protein kinase domain profile. | 586 | 706 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci13g1330 | 706 | FunFam | Leucine-rich repeat receptor-like kinase | 387 | 518 | - | - | |
Prci13g1330 | 706 | Pfam | Malectin-like domain | 46 | 375 | IPR024788 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g1330 | Prci-Chr13 | 12053349 | 12059557 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g1330 | 42 | 693 | Receptor kinase-like Gene Family | AT2G19230 | 42.793 | 1.97e-161 | 486 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Prci13g1330 | Malectin_like | 1.7e-82 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g1330 | - | - | pcin:129289896 | 743.806 |