Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1330 ATGGAAAGGGCACTAAAGTTGAACCTGTCCTTAGTCTGGTGCCATGTTTTCATCCTACTTTTCCTTATTGGCAATACTATAGGAGATGGAAGGAAACTCATCACCAAAGTGGATAGGAACCCTGGATTCATAAGCATTGATTGTGGATCGCCAATTGATTACTTTGATGAAGAAACTAATATTTGGTATCAGACCGACAAAAACTTTATTGACACTGGTAAAAATGCTATGGTCCTCCCAAGCTCCAACACTGATTATCCTTATTTTGGGGGACTTTTGAACACGTTGAGAAGTTTCCCAAATGGAACAAGGAACTGCTATACTCTCAAACCAAAACAAGGCAAGCACCATACTTATCTCATCAGAGCTTACTTTGCATATGGAAATTACGACGGCAACAACCAAACTCCATCCTTTGACTTGTATATTGGCGTCAATCGTTGGGATACTTTTAACTGGGGTCGAAAAGATTATTACATAACCGAGACCATTCATACTCCAACAACTGACACCATACATGTGTGCCTTGTAAAAACTGTCATCGGAGTACCTTTCATTTCTGCATTGGAACTTCGTCCTCTCAGCAATTCCATCTATCAAACTCCTTCGCCTTCTCAATCACTTTTAATCAGTCAAGGAAGATTTGATGTTGCCTCCACTAGCTTAGTCTGGCACAGCAGGTACAAAGATGACATTTACGATCGTCTGTGGCGCTATATGAATTCATCATATCAGATCAATGGATCTGTGGATATTGGTCCTGCAAGCATGAACAGTTCTTATAAATTACCAGCAGAAGTACTGAAATCGGCAGCCCGATCGTTTAATCTCTCCTATGGATTAAATTTTGAGTATAACTCTATTTGGAAAAACCTTGACAAGTCTTCCCAGTATTATGTCTACTTTCACTTTCTTGAAATTCAGAAACTTCCTCCTGGCCAAAAAAGAATAATCAATATTGATGTTGATGGTGAAAACATCCTCTCCCAGCCAATAATTCTTGAATACTTGAAGCCACAAACCATTGTTCCTAAAAATGCAACTCCTGGTTATGTACGCTTTAACATCAGTGCAGCCTCAAAATCTGACGCGCCTCCAATCCTCAATGCTTTTGAGGTTTATAAGTTCATTTCTCCGCTTCCTTCCCCAACTGACAAAACAGATGTGGATGCTATAATGGGCGTCAAAAACACATACAAGATCTTCAATTTAGACTGGCAAGGAGATCCATGTGTTCCAGAACTTGCTTGGGATGGACTAAACTGTAGTTCTAGTTTCAATGGCTACAACGCAAGGATCACCTCAGTGAACTTAAGTGCGACAAAATTGACAGGGCAAATAGCTACTTCATTTTCACAACTTTCAGAGCTGGAGTCACTAGATTTGTCATTTAATAACTTGTCAGGATCAGTACCAGAATTTTTAGCAACATTGCCAAAGCTAAGAGTCCTTAATTTGAGTGGTAACAAGCTCACAGGTTCAATTCCAAAGGCTATTATGGAAAAGTCATATGTAACTTTGCAATTGAGTTTGGCGGATAATCCTGGTCTTTGTCTGGAGGATTCGTGCAAAAGGTCAAAGTTAGTTATTCCACTTGTTGCTTCAGTTTCTGCTTTGATTGTAATCTTCTTGGTTTCTTTAGGAATATGGATCTTGAAAACCAAGAAATTAAAAGTGGTTATCAGTTTTTCTACAAATGAAGAATCCTTCCAAAAAAATCGAGCTGTTTCTTACTCAAGAGTTCTTAGAATCACTAATAACTTGCAAAACTTAATTGGAGAAGGAGGATTTGGTAAGGTTTATCATGGCACTCTGAAGAATAATACTCAAGTTGCCGTGAAGTTGCTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCTGAGGTTGAACTTTTAATGGTTGTCCATCATAGACACTTGGTTTCTCTAATTGGATATTGTGAAGAAGGGGGTGTGAGAGCACTGATTTATGAATATATGGCTAACGGCAATCTCCAACAACATTTATCAGAGGATAACCCTGGTGTTTTGAAATGGAATGAGAGACTTCAAATTGCTTTGGATGCAGCACACGATTATGACACATTTGGCTACTCAATGGAAATGCAGGATTAG 2121 0.388 MERALKLNLSLVWCHVFILLFLIGNTIGDGRKLITKVDRNPGFISIDCGSPIDYFDEETNIWYQTDKNFIDTGKNAMVLPSSNTDYPYFGGLLNTLRSFPNGTRNCYTLKPKQGKHHTYLIRAYFAYGNYDGNNQTPSFDLYIGVNRWDTFNWGRKDYYITETIHTPTTDTIHVCLVKTVIGVPFISALELRPLSNSIYQTPSPSQSLLISQGRFDVASTSLVWHSRYKDDIYDRLWRYMNSSYQINGSVDIGPASMNSSYKLPAEVLKSAARSFNLSYGLNFEYNSIWKNLDKSSQYYVYFHFLEIQKLPPGQKRIINIDVDGENILSQPIILEYLKPQTIVPKNATPGYVRFNISAASKSDAPPILNAFEVYKFISPLPSPTDKTDVDAIMGVKNTYKIFNLDWQGDPCVPELAWDGLNCSSSFNGYNARITSVNLSATKLTGQIATSFSQLSELESLDLSFNNLSGSVPEFLATLPKLRVLNLSGNKLTGSIPKAIMEKSYVTLQLSLADNPGLCLEDSCKRSKLVIPLVASVSALIVIFLVSLGIWILKTKKLKVVISFSTNEESFQKNRAVSYSRVLRITNNLQNLIGEGGFGKVYHGTLKNNTQVAVKLLSQSSMQGFREFRSEVELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLQQHLSEDNPGVLKWNERLQIALDAAHDYDTFGYSMEMQD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1330 706 FunFam Leucine-rich repeat receptor-like protein kinase 564 661 - -
Prci13g1330 706 ProSitePatterns Protein kinases ATP-binding region signature. 592 614 IPR017441 GO:0005524
Prci13g1330 706 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Prci13g1330 706 PANTHER OS07G0107800 PROTEIN-RELATED 44 693 - -
Prci13g1330 706 Gene3D Transferase(Phosphotransferase) domain 1 567 694 - -
Prci13g1330 706 SMART tyrkin_6 586 706 IPR020635 GO:0004713|GO:0006468
Prci13g1330 706 PRINTS Leucine-rich repeat signature 457 470 - -
Prci13g1330 706 PRINTS Leucine-rich repeat signature 478 491 - -
Prci13g1330 706 SUPERFAMILY Protein kinase-like (PK-like) 567 692 IPR011009 -
Prci13g1330 706 Gene3D - 219 376 - -
Prci13g1330 706 Pfam Protein tyrosine and serine/threonine kinase 588 693 IPR001245 GO:0004672|GO:0006468
Prci13g1330 706 Gene3D Ribonuclease Inhibitor 392 510 IPR032675 -
Prci13g1330 706 SUPERFAMILY L domain-like 423 528 - -
Prci13g1330 706 ProSiteProfiles Protein kinase domain profile. 586 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1330 706 FunFam Leucine-rich repeat receptor-like kinase 387 518 - -
Prci13g1330 706 Pfam Malectin-like domain 46 375 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1330 Prci-Chr13 12053349 12059557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1330 42 693 Receptor kinase-like Gene Family AT2G19230 42.793 1.97e-161 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1330 Malectin_like 1.7e-82 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1330 - - pcin:129289896 743.806