Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1326 ATGGATGACATCTATGATCGTGTGTGGCGCTATGACCAAGTTTCTAAAGTGGAAGATTGGCAGCCATTCAATAGATCTGTAAATATTGATTGTGGAAGCACAAATGATTCTTATAAATTACCATCGAAAGTGTTGATATCTGCAGCCCAATCATTGAATGGCTCATTTGCTTTAAACTTTAGCGTTTCCGACTGGGGTGGTACATTAGAAAAGTCTTTCACCTTTTATGTCTACTTTCACTTTGCTGAAATTGAGCAGCTTCTCCCAGGGCAAAAAAGAGTAATCGATATTACTCTTAATGATGAAACCATCCTCAAAGAGCCTTTAGCTCTGGAATACTTGAAACCACAGACAGTTTCTGCTGTTACAAATCGAAGTGATATTCCTTTCAGCATAAGTGCAACATTAGAATCCGATGCTCCTCCAATCCTCAATGCATTTGAGATTTATAGATTCGTATCGCCACTAATTTCCCCGACGGACCAAGTAGATGTGGATGCCATTCTGGACATCAAAATAACATACAAAATCTCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCCGAGGAACATGCATGGCAGGGACTTAACTGCAGATATGGCATCGATGAGTCTAACGCAAGAATCACCTCATTGGATTTGTCAGGCAATGATTTATCAGGGTCAATACCAGAATTTCTAGCTGGATTGACAAAGTTGAGAGTTCTTATTTTAAGTAGCAACAAGCTTGCCGGCTCAATTCCAAAAGCTCTTGAGGACAAACCAGATCTGCAAATAAGCTTAGATGATAACCCCGGCCTCTGTTCGAGGGATTCATGCAAAAAGCACAAGTTCGTTGTTCCAGTTACTGTAGCTGTTTTAGTGTTGACTGTCATTATCTTGGTTATTTCCCTAGGAATATGGATCTTCAAATTGAAAAAAAAGAAAGTGGATTCTACTGTTTCAACAAAGCAAGAAGCATCTGAATATTCAAGAAATCGTGCCTTTTCTTACTCCGAAATTCTTGAAATCACTGATAACTTTCAAAACTTGATTGGACATGGAGGATTTGGAAAAGTTTATTTTGGAACTCTTAAGAATAATACTCCAGTTGCTGTCAAGTTACTTTCTCAATTATCAATGCAAGGTCATAGAGAATTTCGATCGGAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTAGTTTCTCTGATAGGGTACTTTGAAGGAAGTGGTGTTAGGGCATTAATTTATGAGTACATGGCCAATTGTGACCTCCACCAACACTTATCAGGTAACAAGGCTGGTGCTTTGAAATGGAAGGACAGGCTTCAAATTGCAGTGGACGCAGCACATGGATTAGACTATTTGCATAATGGTTGTAAACCTGCAATAGTTCATAGAGACCTAAAGGCTTCCAACATTCTGCTGGATAAAAATATGGAATCTAAGATTGCTGACTTTGGGTTGTCTAGAGCTTTTGCAAATGATATTGACAGTCATGTGTCAACTCGCCCTGCTGGAACATTTGGATATCTTGATCCTGAATTTCAAAATTCTGGAAACCTTACGAAAGGAAGTGATGTTTATAGTTTTGGAATTATTTTGTTAGAGCTAATTACTGGAAAACCAGCGGCGAAAAGACAACCAGACCATACGTTTAGTCTCCTACTTCAATGGGTCACTCTTAGACTTGGTGGCAAGGATATTGAGTCCATCATTGATCCAGGGTTACAAGGACAATATAGTTCTGATTCTGCTTGGAAATTTCTAGAGATAGCCGTATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTAGTGTTTGAACTAAGGGAATGCTTGGCAATGGAAATAAGCTTGGGAAAGATCACTAGCCACAACACCAATAGTTCAAGCAATTCCATGGATATGAGCACCTCGAAATTTGATTCGGGCTTTAGTACTCTGTCTGGTAGATAG 1959 0.3936 MDDIYDRVWRYDQVSKVEDWQPFNRSVNIDCGSTNDSYKLPSKVLISAAQSLNGSFALNFSVSDWGGTLEKSFTFYVYFHFAEIEQLLPGQKRVIDITLNDETILKEPLALEYLKPQTVSAVTNRSDIPFSISATLESDAPPILNAFEIYRFVSPLISPTDQVDVDAILDIKITYKISKVDWQGDPCVPEEHAWQGLNCRYGIDESNARITSLDLSGNDLSGSIPEFLAGLTKLRVLILSSNKLAGSIPKALEDKPDLQISLDDNPGLCSRDSCKKHKFVVPVTVAVLVLTVIILVISLGIWIFKLKKKKVDSTVSTKQEASEYSRNRAFSYSEILEITDNFQNLIGHGGFGKVYFGTLKNNTPVAVKLLSQLSMQGHREFRSEVELLMVVHHRHLVSLIGYFEGSGVRALIYEYMANCDLHQHLSGNKAGALKWKDRLQIAVDAAHGLDYLHNGCKPAIVHRDLKASNILLDKNMESKIADFGLSRAFANDIDSHVSTRPAGTFGYLDPEFQNSGNLTKGSDVYSFGIILLELITGKPAAKRQPDHTFSLLLQWVTLRLGGKDIESIIDPGLQGQYSSDSAWKFLEIAVSCTAPSAIQRPDISQVVFELRECLAMEISLGKITSHNTNSSSNSMDMSTSKFDSGFSTLSGR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1326 652 Gene3D - 1 152 - -
Prci13g1326 652 SUPERFAMILY L domain-like 209 259 - -
Prci13g1326 652 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1326 652 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Prci13g1326 652 CDD STKc_IRAK 346 610 - -
Prci13g1326 652 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Prci13g1326 652 Pfam Malectin-like domain 1 151 IPR024788 -
Prci13g1326 652 SMART serkin_6 340 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1326 652 Pfam Protein tyrosine and serine/threonine kinase 342 607 IPR001245 GO:0004672|GO:0006468
Prci13g1326 652 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Prci13g1326 652 PANTHER OS07G0107800 PROTEIN-RELATED 2 619 - -
Prci13g1326 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Prci13g1326 652 FunFam Leucine-rich repeat receptor-like protein kinase 314 415 - -
Prci13g1326 652 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 416 622 - -
Prci13g1326 652 Gene3D Transferase(Phosphotransferase) domain 1 416 634 - -
Prci13g1326 652 MobiDBLite consensus disorder prediction 628 652 - -
Prci13g1326 652 Gene3D Ribonuclease Inhibitor 166 266 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1326 Prci-Chr13 11905699 11911790 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1326 3 645 Receptor kinase-like Gene Family AT1G51800 38.873 1.79e-161 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g1326 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1326 - - pcin:129289894 1247.65