Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1296 ATGGAAGAGAGCAAAGGAAGAGTATGTGTCACAGGTGGTACTGGCTTTATTGGTTCCTGGATCATCAAGGTACTACTTGAAGATGGCTATTCTGTTAATACTACCATTAGATCTTACCCAGAACACGTGAAAGATGTGAGCTTCCTCACAAATTTGCCAGGAGCATCTCAGAGGCTACAAATTCTGAACGCAGACCTAAACGACCCAGAAAGTTTCAAGGAAGCCATTGAAGGGTGCATTGGAGTATTCCATGTGGCTACTCCAGTAGATTTTGAGGAAAAGGAACCTGAGGAGATTGTGACCAAGAGATCCATTGATGGGGCATTGGGAATTCTGAAGGCATGCCTCACTTCAAAAACTGTGAAGAGAGTTGTTTACACTTCCAGTTCCTCTGCTGTTGCTTTTATTGGCAAAGGCGATGAAGTGAAGGATGAGAGCTTCTGGAGTGACGTGGATTTACTTAGAACTTCAGAGACATACGGATGGTCCTATGCAGTTTCTAAGACATTGACAGAAAAAGCTGTGCTTGAATTTGGAGAACAAAATGGATTAGATATTGTGACTCTGATTCCCACTTTTGTTGTTGGACCATTCATTTGTCCTAAGCTTCCTGGCTCTGTTGGTTCAATACTCTATTTTTTATTTGATAAGAAGGACCCATTCAGTTATCTGCAAATACCTGTGGTTCATGTTGATGACGTGGCAAGGGCACACATATTTCTGCTTGAACATCCCAATCCCAAAGGGAGATATAATTGTTCTACGTGTTTGGCAATCATTGAAGAAGTGTCTGAAGTTGTGTCTGCTAAATACCCAGAATTTCAAATGCCAACCATAGATTCCTTAAGAGAAAGCACAAGCTTGAAATTTCCAGATCTCTCATCTAATAAGCTCATAGATGCTGGATTTGAGTTCAAGTATGGACTTGAGGAAATGTTGGTGGACGCAATTGAAAGTTGCAAAGAGAAGGGTTATTTGTAG 981 0.4118 MEESKGRVCVTGGTGFIGSWIIKVLLEDGYSVNTTIRSYPEHVKDVSFLTNLPGASQRLQILNADLNDPESFKEAIEGCIGVFHVATPVDFEEKEPEEIVTKRSIDGALGILKACLTSKTVKRVVYTSSSSAVAFIGKGDEVKDESFWSDVDLLRTSETYGWSYAVSKTLTEKAVLEFGEQNGLDIVTLIPTFVVGPFICPKLPGSVGSILYFLFDKKDPFSYLQIPVVHVDDVARAHIFLLEHPNPKGRYNCSTCLAIIEEVSEVVSAKYPEFQMPTIDSLRESTSLKFPDLSSNKLIDAGFEFKYGLEEMLVDAIESCKEKGYL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1296 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 317 - -
Prci13g1296 326 CDD FR_SDR_e 8 303 - -
Prci13g1296 326 Gene3D - 5 326 - -
Prci13g1296 326 FunFam Dihydroflavonol 4-reductase family 6 326 - -
Prci13g1296 326 Pfam NAD dependent epimerase/dehydratase family 8 252 IPR001509 -
Prci13g1296 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1296 Prci-Chr13 11457424 11459212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1296 4 326 Monolignol Biosynthesis Gene Families AT2G02400 36.086 2.43e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1296 - K13265 gmx:100796029 494.582