Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1290 ATGGAAGAGGGAAAAGGAAGAGTATGTGTTACAGGTGGTACTGGCTTTATTGGATCATGGATCGTTAAGAGACTGCTTGAGGACGGTTATTCTGTTAATGCAACCATTAGATCTCACCCAGATTTGAGCTTCCTCACAAATCTACCAGGGGCATCTCAAAAGCTTCAAATATTCAAGAACGCAGAACTAAACAATCCAGATAGTTTCAAGGAAGCCATTGAAGGGTGCATGGGAGTGTTCCATGTGGCTACCCCACTGGATCTTGATGACCCTGAAGAAGTATTGACAAAAAGATCAATTGATGGAGCATTGGGCATTTTAAAGGCATGCCTTGCTTCAAAAACTGTGAAGAGAGTTGTTTACACTTCTAGTGGCGTTACTGTTTCTTTCGATGGCAAAAAAGATGATGATAATGATGATGAAGTGATGAAGGATGAGAAATGTTGGAGTGACATAGAATATCTTAGAAGCTTGAAGACATCATTGGGATGGTGGTCTTATGCGATTTGTAAGACATTGACAGAGAAGGCAATGCTTGAATTTGGAGAACAAAATGGATTAGAAGTTGTAACTTTGCTTCCCACTCATGTTCTTGGATCCTTCATCTGTCCTAAGCTTCATGGCTCTCATCGCACTACCTTGGATTTGGCATTTGGTGGGGGGGACGCAGGGGCTTATTTACAGACACCTGTAGTGCATGTGGATGACGTGGCAAGGGCCCATATATTTCTGCTTGAACATCCCAATCCAAAAGGGAGGTATATTTGTTCAGCTTGTTCGGTAACTATTGAAGACATATATGAAATTCTATCTGTTAAATATCCAGAATTTCAAATACCAAACAGAGACTATTTGAAGGAAATGAAAGGTCCCAAATTTTCGTCTCCATCATCAAAGAAGCTCATGGACGCTGGGTTTGAGTTCAAGTACGGGGTTGAGGAAATAATTGTTGATTCAATTGAAAGCTGCAAAGAAAATGGTTATTTGTAA 990 0.4051 MEEGKGRVCVTGGTGFIGSWIVKRLLEDGYSVNATIRSHPDLSFLTNLPGASQKLQIFKNAELNNPDSFKEAIEGCMGVFHVATPLDLDDPEEVLTKRSIDGALGILKACLASKTVKRVVYTSSGVTVSFDGKKDDDNDDEVMKDEKCWSDIEYLRSLKTSLGWWSYAICKTLTEKAMLEFGEQNGLEVVTLLPTHVLGSFICPKLHGSHRTTLDLAFGGGDAGAYLQTPVVHVDDVARAHIFLLEHPNPKGRYICSACSVTIEDIYEILSVKYPEFQIPNRDYLKEMKGPKFSSPSSKKLMDAGFEFKYGVEEIIVDSIESCKENGYL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1290 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Prci13g1290 329 Gene3D - 5 329 - -
Prci13g1290 329 Pfam NAD dependent epimerase/dehydratase family 8 250 IPR001509 -
Prci13g1290 329 CDD FR_SDR_e 8 306 - -
Prci13g1290 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 327 IPR036291 -
Prci13g1290 329 FunFam Dihydroflavonol reductase 5 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1290 Prci-Chr13 11395986 11399235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1290 4 329 Monolignol Biosynthesis Gene Families AT2G02400 35.952 2.31e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1290 - K13265 gmx:547570 408.683