Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1280 ATGGATTGTGGGTCGTCTTCTAGCAGCAAGAATAATAACATGAATGGTCAGAGAGGACCTTGTGGGGCGTGCAAATTCCTCCGGCGAAAGTGCGTCAAGGGCTGCGTATTTGCACCGTTCTTCGACTCCGATCAAGGCACGGCTCACTTCGCGGCGGTTCACAGGGTGTTCGGAGCCAGCAACGCCGCCAAGCTGCTCCTACGAATCCCTCCTCACCACCGCCTCGATGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCGCCCTTCAGCAACAGGTAATAAACTTACAGGCAGAGTTAGCTTACGTGCAAGCTCGTCTCTCAACGTTGCAACGTCTCCCAATGGTTGCGACTCTTCCTCAACACCAAACCTCTTCATCTTCTAACAATGACTTTCCCTTTGATCCAACTAATTCACTTCAGTACTCAACTTTTTTCAACCCTTGTGATCTTCATCATGATGCTGATCTTCAAGCTTTGGCAAGAGATTTTGTATCAAGAATGAAAAGAGAAGAAAATCTAAATGGGACTTTTCTTAGCAAGAGAAAGAGAAAGAAGTTTTTTCTCCCTTTTCCTTTTCCCTTTTCCCTTTTTTCATCACTCAATTCAAGCAGCTTTGGAAAAACCAACCGGCCAACGGATTTTTCACCTCTTGGAATTTTTTCTGGAAGCAGTGAAAAGAAATCTAAGTACTGGTGTACTGCTGAGAAGAAGCTTGCTGAATTGAAGATGGAGGAGTGGGTAGCTACAAGGTTGATGTCTGGAAAAGCTTTTATTATTATTAGTTTTTATGTTTCTGAGAAGCGTTTGGTAGTATCTGATGCGTTTTGTTTGCGTGAGGAGCAGAAGATTTGA 897 0.456 MDCGSSSSSKNNNMNGQRGPCGACKFLRRKCVKGCVFAPFFDSDQGTAHFAAVHRVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFALQQQVINLQAELAYVQARLSTLQRLPMVATLPQHQTSSSSNNDFPFDPTNSLQYSTFFNPCDLHHDADLQALARDFVSRMKREENLNGTFLSKRKRKKFFLPFPFPFSLFSSLNSSSFGKTNRPTDFSPLGIFSGSSEKKSKYWCTAEKKLAELKMEEWVATRLMSGKAFIIISFYVSEKRLVVSDAFCLREEQKI 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1280 298 ProSiteProfiles LOB domain profile. 19 121 IPR004883 -
Prci13g1280 298 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 157 - -
Prci13g1280 298 Pfam Lateral organ boundaries (LOB) domain 20 118 IPR004883 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci13g1280 Prci-Chr13 11305544 11337674 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1280 11 181 AS2 family AT4G00210 51.923 1.65e-65 203
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci13g1280 LOB 9.8e-35 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1280 13 11305544 11337674 Prci13g1280 13 11305544 11337674 ECH