Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1279 ATGAGTTCAAACTCGGCCAGTACCGTTACTGGCGGCGGTGGTGGAAGCGGCGGATGCGGCGGCGGCGGCGGAGGTAGCGGCGGCGGCGGTGGGCCGTGCGGTGCCTGCAAGTTTCTGAGGAGGAAGTGCGTGGCGGGGTGCATCTTCGCGCCGTACTTCGACTCGGAGCAAGGCGCGACGCACTTCGCGGCGGTGCATAAGGTGTTCGGAGCCAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTTCACAAGCGGCTCGACGCCGTGGTCACAATTTGCTTCGAGGCTCAGGCTCGGCTCAGAGATCCTGTCTATGGCTGTGTCGCCAATATCTTCGCTCTTCAGCAACAGGTTGTAAATCTACAAGCAGAACTTTCCTATTTGCAAGGCCACCTTGCTACATTACAATTGCCCCAACCACCACCACCACCACCACCTCCACTGCCACAAGCAATACCAACACCAACAACACTTTCTATTGCCAACATTTCAACCGGGATGACCTCTTCTCTCCCGGCAACATATGATTTATCATCTCTCTTTGATCCAATAGTCCAAACATCTTGGGCCTTACCACAACGGCCCATGGACCTAAGCCAATATGGGCCTGGCAGCTCATCATCAGGTGGTAGCGGTGGTGGCGATCTTCATGCCCTAGCAAGAGAACTCCTCAACAGACATGGGTCTCCTCCATCTTCATCACCTATGGCTTGCTCTAAAGCTTCCTCTTCATCTCCATCACTTTCCAAATGA 756 0.5476 MSSNSASTVTGGGGGSGGCGGGGGGSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVNLQAELSYLQGHLATLQLPQPPPPPPPPLPQAIPTPTTLSIANISTGMTSSLPATYDLSSLFDPIVQTSWALPQRPMDLSQYGPGSSSSGGSGGGDLHALARELLNRHGSPPSSSPMACSKASSSSPSLSK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1279 251 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Prci13g1279 251 MobiDBLite consensus disorder prediction 197 251 - -
Prci13g1279 251 MobiDBLite consensus disorder prediction 137 154 - -
Prci13g1279 251 MobiDBLite consensus disorder prediction 228 251 - -
Prci13g1279 251 MobiDBLite consensus disorder prediction 137 156 - -
Prci13g1279 251 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
Prci13g1279 251 PANTHER LOB DOMAIN CONTAINING PROTEIN 30 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1279 Prci-Chr13 11247633 11253711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1279 33 232 AS2 family AT2G45420 63.981 3.44e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci13g1279 LOB 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1279 K21994 - pvy:116128124 283.493