Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1269 ATGCAGAAAGCTTGGGTGTATGAGGAGCATGGTCCTGTGGAAGTGCTTAAGCTCACCAATTTTCATTGTCCCGCTCCTAAAGAAAATCAACTTCTCGTTCAAGTCAGAGCCGCTGCTTTAAATCCTATTGATTTCAAGAGGCGTCAAAGACCCATCTTTCCTTCAGATTTTCCTGTCATCCCAGGCTGTGACATGGCAGGTGTGGTAGTGGGAAAAGGGGAAGCAGTGACAAAATTCAAAATAGGAGATGAAGTCTATGGAAACATCCAAGACTTCAACAATGGAAAGCGACTGAAACAACTTGGAACACTGGCACAGTTGATAGTGGTGGAAGAGAACTTAGTTGCAGAGAAACCGGAGTGCCTGTCCTTCGAGGAGGCGGCGAGCTTGCCGCTGGCGGTTCAGACGGCGGTGGAGGGATTCGAAACCGCCAAGTTTAAAGAAGGGCAAAACGTGTTCGTGGTCGGTGGAGCAGGTGGTGTTGGAAGCCTGGTGATTCAGTTGGCAAAGCATTTGTATGGAGCTTCTTGTGTTGTGGCCACAACAAGTACTCCTAAAGTTGACTTTGTGAAGCAGTTGGGAGCTGACAAGGTTGTCGACTATAGTGAGACCAAGTATGAGGACATTGAGGACAAGTTTGATCTTGTGTACGACACAATCGGTATAGTGGGGAACATAACTCAGGAGAAAGCAAGAAGTCGTATGTGGTGGCAAAAGATGAAGGAGTGA 729 0.4733 MQKAWVYEEHGPVEVLKLTNFHCPAPKENQLLVQVRAAALNPIDFKRRQRPIFPSDFPVIPGCDMAGVVVGKGEAVTKFKIGDEVYGNIQDFNNGKRLKQLGTLAQLIVVEENLVAEKPECLSFEEAASLPLAVQTAVEGFETAKFKEGQNVFVVGGAGGVGSLVIQLAKHLYGASCVVATTSTPKVDFVKQLGADKVVDYSETKYEDIEDKFDLVYDTIGIVGNITQEKARSRMWWQKMKE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1269 242 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 226 IPR036291 -
Prci13g1269 242 SUPERFAMILY GroES-like 2 154 IPR011032 -
Prci13g1269 242 Gene3D - 9 140 - -
Prci13g1269 242 Gene3D - 141 223 - -
Prci13g1269 242 Pfam Zinc-binding dehydrogenase 160 221 IPR013149 -
Prci13g1269 242 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 223 IPR044626 GO:0016628
Prci13g1269 242 SMART PKS_ER_names_mod 11 231 IPR020843 GO:0016491
Prci13g1269 242 Pfam Alcohol dehydrogenase GroES-like domain 29 88 IPR013154 -
Prci13g1269 242 CDD MDR_like_2 3 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1269 Prci-Chr13 11044825 11048434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1269 28 223 Monolignol Biosynthesis Gene Families AT4G39330 25.225 3.82e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1269 K18980 - jre:109010331 350.132