Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1268 ATGCAGAAAGCTTGGGTGTATGAGGAGCATGGTCCTGTGGAAGTGCTTAAGCTCACCAATTTTCATTGTCCCGCTCCTAAAGAAAATCAACTTCTCGTTCAAGTCAGAGCCGCTGCTTTAAATCCTATTGATTTCAAGAGGCGTCAAAGACCCATCTTTCCTTCAGATTTTCCTGTCATCCCAGGCTGTGACATGGCAGGTGTGGTAGTGGGAAAAGGGGAAGCAGTGACAAAATTCAAAATAGGAGATGAAGTCTATGGAAACATCCAAGACTTCAACAATGGAAAGCGACTGAAACAACTTGGAACACTGGCACAGTTGATAGTGGTGGAAGAGAACTTAGTTGCAGAGAAACCGGAGTGCCTGTCCTTCGAGGAGGCGGCGAGCTTGCCGCTGGCGGTTCAGACGGCGGTGGAGGGATTCGAAACCGCCAAGTTTAAAGAAGGGCAAAACGTGTTCGTGGTCGGTGGAGCAGGTGGTGTTGGAAGCCTGGTGATTCAGTTGGCAAAGCATTTGTATGGAGCTTCTTGTGTTGTGGCCACAACAAGTACTCCTAAAGTTGACTTTGTGAAGCAGTTGGGAGCTGACAAGGTTGTCGACTATAGTGAGACCAAGTATGAGGACATTGAGGACAAGTTTGATCTTGTGTACGACACAATCGGAGAAAGCAAGAAGTCGTATGTGGTGGCAAAAGATGAAGGAGTGATTGTGGACATAACGTGGCCTCCATCGCATCCAAGAGCAATTTATTCAAGCTTGACAGTTTCTGGCCAAATCTTGGAGCGGCTCAGGCCATCTCTCCAGAGTCACCATCTCAAACCTGTCATTGATCCTTCAAGTCCTTATAACTTCTACGACGTCGTTCAGGCTTTTCGATATCTTGAAACTGGTCGAGCTTGGGGAAAAGTCGTCGTCTCCGATTTCCCCTCACAACTCCACTAA 942 0.4745 MQKAWVYEEHGPVEVLKLTNFHCPAPKENQLLVQVRAAALNPIDFKRRQRPIFPSDFPVIPGCDMAGVVVGKGEAVTKFKIGDEVYGNIQDFNNGKRLKQLGTLAQLIVVEENLVAEKPECLSFEEAASLPLAVQTAVEGFETAKFKEGQNVFVVGGAGGVGSLVIQLAKHLYGASCVVATTSTPKVDFVKQLGADKVVDYSETKYEDIEDKFDLVYDTIGESKKSYVVAKDEGVIVDITWPPSHPRAIYSSLTVSGQILERLRPSLQSHHLKPVIDPSSPYNFYDVVQAFRYLETGRAWGKVVVSDFPSQLH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1268 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 258 IPR036291 -
Prci13g1268 313 Gene3D - 9 305 - -
Prci13g1268 313 CDD MDR_like_2 3 305 - -
Prci13g1268 313 SMART PKS_ER_names_mod 11 305 IPR020843 GO:0016491
Prci13g1268 313 Pfam Alcohol dehydrogenase GroES-like domain 29 88 IPR013154 -
Prci13g1268 313 Pfam Zinc-binding dehydrogenase 193 305 - -
Prci13g1268 313 SUPERFAMILY GroES-like 2 154 IPR011032 -
Prci13g1268 313 Gene3D - 141 256 - -
Prci13g1268 313 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 307 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1268 Prci-Chr13 11044603 11048434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1268 28 220 Monolignol Biosynthesis Gene Families AT4G39330 25.114 9.55e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1268 K18980 - pvy:116131113 477.633