Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1255 ATGAAATGCCTTGATATTCTACTTGAAGACACTGATGTTGTGAAAGCAGTAATAGAATTTGTCTCTTCTGCTGCAATTGAGAACTTGGTGCTTGGGGCAACTACAAGGCATGGATTCATTAGATTTAAGTCATCAACTATACCAAGTGGCATATCCAAAGGGGCACCAGATTTCTGCACTGTGTATGTCATATCTAAGGGAAAAATATCTTCTGTCCGAAATGCTTCTCGCCCAGCTCCTCACGCCTCTCCTCTGCTTAGTAAAATGCAGAATCTAGATAACCAAAATGAGAGTCACACTGAGATGCCCTCCAGACATATGCCTTTGCGAGACAAAACACCTACCAAACCTCACAGCTGGCAAGATGAATCCATTAGGTCAGCATATGGAAGAGGAAGAGGAGGCTTGAGTGGAAGGTCATGTGTAGACTATGCAGATACAGAATCAGACATATCATTTATAAGCTCAGGCAGACCAAGCAGTGTTCGTCCATCCTCTGTGTTCTATGACTATATGGACGCTACCCCGCGTATTTCAGTCGGCTCAGATCGTAGTTTTGCATCAACTCCTTTAGGCTACAGGCCTATGGATCCCACTTCACCAGATGCATCATTTTCACAAGATGGGGATGGAACATCATTTTCATATTCATCTCAGAACATGGAAGAAGTAGAAACTGATATGAGAAGGTTGAAGCTTGAGTTGAAGCAAACAATGGATATGTACAGTGTAGCATGCAGAGAAGCACTTACGGCACAACAAAAGTTGATGGAGTTGAACAACTGGAGACGCGAGGAAGAGAAGAAGCTAGAAGAGGCACGATTGGCACAAGAAGCTGCATTGGCAATTGCAGAGAAAGAGAAAGCAAGGAGTAAGGCAGCCATGGAAACAGCTGAAGCAGCCAAGAAAATTGCTGCAGTGGAATCTCATAAAAGAGCAAGTGTTGAAATGAAAGCACTGAGAGAAGCAGAAGGAATTAGAAAACTATTGGATAACCTAACCCAAACCGATGGAAGATATAGGAAATATAGTATTGAGGAGATTGAAGTAGCAACAGAATATTTTTCAGAGTCTAGAAAAATTGGAGAAGGTGGGTATGGCCCAGTGTTCAAATGTTATCTTGATCATACACCAGCAGCTGTGAAGGTTCTTCGACCAGATGCTGCTCAAGGGAGGGCACAGTTTCAGCAAGAGGTTGACATACTTAGCTGCATACGCCATCCCAACATGGTACTTCTACTAGGAGCATGTCCAGAATACGGCATACTAATTTATGAATATATGGCTAATGGAAGCCTAGAAGATTGTCTATTTCGCAAGAGAAATCATGATCGTGTTTTGCCATGGCAGTACAGGTTTCGAATCGCGGCAGAAATAGCCACAGGCCTATTGTTTCTGCATCAAACCAAGCCTGAACCTTTAGTACACCGTGATTTAAAGCCTGCCAACATATTACTAGACCATAATTATGTAAGTAAAGTAAGCGATGTTGGATTGGCCAGGTTGGTGCCTGCTGTTGCTGAGAATGTAACGCAATGTCGGATGACTGCAGCAGCAGGGACATTCTGTTACATTGATCCAGAGTATCAACAAACAGGAATGTTGGGAGTGAAGTCTGATGTTTATTCTCTTGGGATTATGCTTCTACAGCTTGTAACAGGCAAGCCTCCAATGGGGTTGGCACACACTGTAGAAGAGGCTATTGAGAATGGTGCATTTGAGGATATGCTTGACCCATCTGTGCCTGATTGGCCTATTGAACAAGCCTTGTGCTTCACAAAGCTAGCACTTAAATGCGCAGAGCTTAGACGAAAAGATCGGCCAGACCTTGGCAAAGTCATACTACCAGAGCTCAATAAATTGAGAGAGTTTGCTGAAGAACACCCTAGTGGCATCTTTTTAGGTGGCATTAGCAGTACTGGGCCCTCCCCTAACCACAGTCAAGCTTCCATACAACAGGATGTGATGAGTGACCCACGGCTTGGCCATTCTGGGAGCTCAAGAAGCCCATCGACCCCATCATCACCCACAGAAACAGAAGGATAG 2046 0.4404 MKCLDILLEDTDVVKAVIEFVSSAAIENLVLGATTRHGFIRFKSSTIPSGISKGAPDFCTVYVISKGKISSVRNASRPAPHASPLLSKMQNLDNQNESHTEMPSRHMPLRDKTPTKPHSWQDESIRSAYGRGRGGLSGRSCVDYADTESDISFISSGRPSSVRPSSVFYDYMDATPRISVGSDRSFASTPLGYRPMDPTSPDASFSQDGDGTSFSYSSQNMEEVETDMRRLKLELKQTMDMYSVACREALTAQQKLMELNNWRREEEKKLEEARLAQEAALAIAEKEKARSKAAMETAEAAKKIAAVESHKRASVEMKALREAEGIRKLLDNLTQTDGRYRKYSIEEIEVATEYFSESRKIGEGGYGPVFKCYLDHTPAAVKVLRPDAAQGRAQFQQEVDILSCIRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKRNHDRVLPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKVSDVGLARLVPAVAENVTQCRMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLVTGKPPMGLAHTVEEAIENGAFEDMLDPSVPDWPIEQALCFTKLALKCAELRRKDRPDLGKVILPELNKLREFAEEHPSGIFLGGISSTGPSPNHSQASIQQDVMSDPRLGHSGSSRSPSTPSSPTETEG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1255 681 ProSiteProfiles Protein kinase domain profile. 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1255 681 MobiDBLite consensus disorder prediction 99 119 - -
Prci13g1255 681 SUPERFAMILY Protein kinase-like (PK-like) 338 613 IPR011009 -
Prci13g1255 681 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 327 427 - -
Prci13g1255 681 Pfam Protein kinase domain 356 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1255 681 MobiDBLite consensus disorder prediction 633 681 - -
Prci13g1255 681 Coils Coil 221 241 - -
Prci13g1255 681 Coils Coil 256 301 - -
Prci13g1255 681 Gene3D Transferase(Phosphotransferase) domain 1 428 630 - -
Prci13g1255 681 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1255 681 MobiDBLite consensus disorder prediction 189 210 - -
Prci13g1255 681 FunFam U-box domain-containing protein 51 428 628 - -
Prci13g1255 681 Gene3D Phosphorylase Kinase; domain 1 328 427 - -
Prci13g1255 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Prci13g1255 681 PANTHER OS02G0152300 PROTEIN 2 663 - -
Prci13g1255 681 MobiDBLite consensus disorder prediction 636 681 - -
Prci13g1255 681 MobiDBLite consensus disorder prediction 74 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1255 Prci-Chr13 10817189 10822046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1255 1 651 Receptor kinase-like Gene Family AT1G78940 59.970 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci13g1255 Pkinase 7.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1255 - - qsa:O6P43_028031 903.279