Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1254 ATGTGGTTTCCAAACCCTAAGGCTTCAGGGATTAGAAAGGGAGGAGGAGGAAATGGTCTCATCGCTGTTGCTATAGATAAGGATAAAGGAAGCCAACAAGCTCTCAAATGGGCTGCTGAAAGTCTGCTTTCAAGAGGCCAAACTGTCATTTTAATCCACGTTTTGCACAAGACATCAGCTCCTACTTCCAACGGAGGATGTCAATCAGTAATATATAACGTGGGAAATCTATCTGCATCACCACAAAGGCACCAACTTGATAAAACTACCAAGGATCTATTTAATACCTTCCATTGCTTTTGTACTCGCAAAGATATGAAATGCCTTGATATTCTACTTGAAGACACTGATGTTGTGAAAGCAGTAATAGAATTTGTCTCTTCTGCTGCAATTGAGAACTTGGTGCTTGGGGCAACTACAAGGCATGGATTCATTAGATTTAAGTCATCAACTATACCAAGTGGCATATCCAAAGGGGCACCAGATTTCTGCACTGTGTATGTCATATCTAAGGGAAAAATATCTTCTGTCCGAAATGCTTCTCGCCCAGCTCCTCACGCCTCTCCTCTGCTTAGTAAAATGCAGAATCTAGATAACCAAAATGAGAGTCACACTGAGATGCCCTCCAGACATATGCCTTTGCGAGACAAAACACCTACCAAACCTCACAGCTGGCAAGATGAATCCATTAGGTCAGCATATGGAAGAGGAAGAGGAGGCTTGAGTGGAAGGTCATGTGTAGACTATGCAGATACAGAATCAGACATATCATTTATAAGCTCAGGCAGACCAAGCAGTGTTCGTCCATCCTCTGTGTTCTATGACTATATGGACGCTACCCCGCGTATTTCAGTCGGCTCAGATCGTAGTTTTGCATCAACTCCTTTAGGCTACAGGCCTATGGATCCCACTTCACCAGATGCATCATTTTCACAAGATGGGGATGGAACATCATTTTCATATTCATCTCAGAACATGGAAGAAGTAGAAACTGATATGAGAAGGTTGAAGCTTGAGTTGAAGCAAACAATGGATATGTACAGTGTAGCATGCAGAGAAGCACTTACGGCACAACAAAAGTTGATGGAGTTGAACAACTGGAGACGCGAGGAAGAGAAGAAGCTAGAAGAGGCACGATTGGCACAAGAAGCTGCATTGGCAATTGCAGAGAAAGAGAAAGCAAGGAGTAAGGCAGCCATGGAAACAGCTGAAGCAGCCAAGAAAATTGCTGCAGTGGAATCTCATAAAAGAGCAAGTGTTGAAATGAAAGCACTGAGAGAAGCAGAAGGAATTAGAAAACTATTGGATAACCTAACCCAAACCGATGGAAGATATAGGAAATATAGTATTGAGGAGATTGAAGTAGCAACAGAATATTTTTCAGAGTCTAGAAAAATTGGAGAAGGTGGGTATGGCCCAGTGTTCAAATGTTATCTTGATCATACACCAGCAGCTGTGAAGGTTCTTCGACCAGATGCTGCTCAAGGGAGGGCACAGTTTCAGCAAGAGGTTGACATACTTAGCTGCATACGCCATCCCAACATGGTACTTCTACTAGGAGCATGTCCAGAATACGGCATACTAATTTATGAATATATGGCTAATGGAAGCCTAGAAGATTGTCTATTTCGCAAGAGAAATCATGATCGTGTTTTGCCATGGCAGTACAGGTTTCGAATCGCGGCAGAAATAGCCACAGGCCTATTGTTTCTGCATCAAACCAAGCCTGAACCTTTAGTACACCGTGATTTAAAGCCTGCCAACATATTACTAGACCATAATTATGTAAGTAAAGTAAGCGATGTTGGATTGGCCAGGTTGGTGCCTGCTGTTGCTGAGAATGTAACGCAATGTCGGATGACTGCAGCAGCAGGGACATTCTGTTACATTGATCCAGAGTATCAACAAACAGGAATGTTGGGAGTGAAGTCTGATGTTTATTCTCTTGGGATTATGCTTCTACAGCTTGTAACAGGCAAGCCTCCAATGGGGTTGGCACACACTGTAGAAGAGGCTATTGAGAATGGTGCATTTGAGGATATGCTTGACCCATCTGTGCCTGATTGGCCTATTGAACAAGCCTTGTGCTTCACAAAGCTAGCACTTAAATGCGCAGAGCTTAGACGAAAAGATCGGCCAGACCTTGGCAAAGTCATACTACCAGAGCTCAATAAATTGAGAGAGTTTGCTGAAGAACACCCTAGTGGCATCTTTTTAGGTGGCATTAGCAGTACTGGGCCCTCCCCTAACCACAGTCAAGCTTCCATACAACAGGATGTGATGAGTGACCCACGGCTTGGCCATTCTGGGAGCTCAAGAAGCCCATCGACCCCATCATCACCCACAGAAACAGAAGGATAG 2361 0.4375 MWFPNPKASGIRKGGGGNGLIAVAIDKDKGSQQALKWAAESLLSRGQTVILIHVLHKTSAPTSNGGCQSVIYNVGNLSASPQRHQLDKTTKDLFNTFHCFCTRKDMKCLDILLEDTDVVKAVIEFVSSAAIENLVLGATTRHGFIRFKSSTIPSGISKGAPDFCTVYVISKGKISSVRNASRPAPHASPLLSKMQNLDNQNESHTEMPSRHMPLRDKTPTKPHSWQDESIRSAYGRGRGGLSGRSCVDYADTESDISFISSGRPSSVRPSSVFYDYMDATPRISVGSDRSFASTPLGYRPMDPTSPDASFSQDGDGTSFSYSSQNMEEVETDMRRLKLELKQTMDMYSVACREALTAQQKLMELNNWRREEEKKLEEARLAQEAALAIAEKEKARSKAAMETAEAAKKIAAVESHKRASVEMKALREAEGIRKLLDNLTQTDGRYRKYSIEEIEVATEYFSESRKIGEGGYGPVFKCYLDHTPAAVKVLRPDAAQGRAQFQQEVDILSCIRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKRNHDRVLPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKVSDVGLARLVPAVAENVTQCRMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLVTGKPPMGLAHTVEEAIENGAFEDMLDPSVPDWPIEQALCFTKLALKCAELRRKDRPDLGKVILPELNKLREFAEEHPSGIFLGGISSTGPSPNHSQASIQQDVMSDPRLGHSGSSRSPSTPSSPTETEG 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1254 786 Gene3D Phosphorylase Kinase; domain 1 433 532 - -
Prci13g1254 786 PANTHER OS02G0152300 PROTEIN 21 768 - -
Prci13g1254 786 Gene3D HUPs 20 169 IPR014729 -
Prci13g1254 786 Coils Coil 326 346 - -
Prci13g1254 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Prci13g1254 786 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Prci13g1254 786 SMART serkin_6 460 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1254 786 FunFam U-box domain-containing protein 51 533 733 - -
Prci13g1254 786 ProSiteProfiles Protein kinase domain profile. 460 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1254 786 Pfam Protein kinase domain 461 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1254 786 Coils Coil 361 406 - -
Prci13g1254 786 MobiDBLite consensus disorder prediction 738 786 - -
Prci13g1254 786 SUPERFAMILY Protein kinase-like (PK-like) 443 718 IPR011009 -
Prci13g1254 786 MobiDBLite consensus disorder prediction 204 224 - -
Prci13g1254 786 Pfam Universal stress protein family 21 147 IPR006016 -
Prci13g1254 786 Gene3D Transferase(Phosphotransferase) domain 1 533 735 - -
Prci13g1254 786 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 168 - -
Prci13g1254 786 MobiDBLite consensus disorder prediction 741 786 - -
Prci13g1254 786 MobiDBLite consensus disorder prediction 294 316 - -
Prci13g1254 786 MobiDBLite consensus disorder prediction 179 226 - -
Prci13g1254 786 CDD STK_N 20 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1254 Prci-Chr13 10817189 10823220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1254 1 756 Receptor kinase-like Gene Family AT1G78940 58.269 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci13g1254 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1254 - - qsa:O6P43_017850 1042.72