Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1205 ATGGAATCGTCTATCTCTCGTAGTGCTAACTCCTCCACCAATGGTCTTCTCTCCGTCAACATCCCCAGCCACAACGATGTCGAACCCCTCCCTCCTCATCAGATCGACGACGACGACGACGTCGTGGATCCCGATGATCCTTTCGATATCACTCACACCAAGAATGCGCCGGTTGAGTCCCTCCAGCGATGGAGACAAGCAGCTCTAGTTCTCAATGCTTCCCGGCGTTTTAGATATACTCTGGACTTGAAAAGGGGGGAGGAGGAAGAGCATAAGAAGGGCTTGATAAGAGCCCATGCCCAAGTCGTACGAGCAGCGCTGCTTTTCAGATTAGCTGGTGAACGTGATCTAGCGGGAGGCACAGGAGTGTCAGGCCCAATCTCAGGTGATAACTTCGGAGTCGGGCTCGAACAACTTGCTTCAATGTCGAAGGATCAGAATATTGCAGCTTTGCAAGAATATGGAGGGGTTAAAGGCTTATCAGATTTACTAAAATCAGATCTTGAGAAAGGAATTAATGGAGATGACGATGATATATTAAAAAGGAAAGTGACATTTGGAACGAATACATACCCTAAGAAAAAGGGGCGGACTTTCTGGATGTTTCTATGGGATGCTTGGCAAGATCTGACCCTTATCATATTGATTATAGCAGCTGTGGTGTCACTGGCACTAGGAATAAAAACAGAGGGCTTGGAAGAAGGATGGTATGATGGAGGAAGCATTGCCTTTGCTGTTTTTCTTGTCATTATAGTAACAGCTGCCAGTGATTATCGCCAGTCTCTGCAGTTTCAGAATTTGAATTCAGAAAAACAAAATATACAATTGGAGGTCATTAGAGGCGGTAGAGCAACAAAGATATCAATATTTGATGTTATTGTTGGTGATGTTGTACCTCTCAAAATAGGAGACCAGGTTCCTGCTGATGGAGTCATAATCACCGCTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAAGACCACAAATCACCTTTTTTGATGTCTGGCTGCAAAGTAGCAGATGGCGTTGGTGTTATGCTGGTAACTGGGGTTGGTATCAATACAGAGTGGGGATTGTTGATGGCCAGCATCTCTGAAGATACTGGAGAAGAGACTCCGTTGCAGGTGCGATTGAATGGAGTTGCAACTTTTATCGGCATGATAGGTCTTACAGTAGCTGCTGTTGTGCTAGCAGTCCTCTTGGGAAGATACTTTTCTGGCAACACAAAAGATCTAAATGGAAATGTCCAATTTGTTGCTGGCCAGACGAGTATCAGCAGTGCAATTGATGGGGTTGTCAAAATTTTCACTATTGCAGTCACAATTGTGGTTGTTGCAGTTCCTGAAGGTCTTCCTCTAGCTGTTACCCTAACCCTGGCATATTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGAAGGCTTTCAGCTTGTGAAACTATGGGCTGTGCAACAACAATTTGCAGTGATAAAACAGGAACGTTGACCTTGAATCAGATGACTGTGGTTGAGGCATGTGTTGGGAGGAAGAAACTGAATTCACCTGATGACCCATCAAAGTTGAATTCAGAAGTTTTATCTCTGATAAAAGAGGGCATTGCACAGAATACAACTGGAACTGTTTTTGTGCCGAAGGATGGTGGAGAGACTGAGGTTTCAGGGTCTCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGAATGGATTTTGATCTTATCAGATCAAATTCAACAGTTCTCCATGTATTTCCCTTCAATTCTGAGAAGAAGCGAGGTGGTGTCTTGCTGAAGCAGAATGTGGACTCCAGAGTACATATACATTGGAAAGGCGCTGCAGAGATAGTACTAGGAAAATGCACTCAATACATTGATTCAAATGGTTCCTTGCTTTGTATTGAAGAAGAGAAGGACTTTTTCAAGGAAGTTATTGAAGACATGGCTGCTCGCAGTTTGCGGTGTGTTGCCATTGCATACAGGTCATATGAATTGGACAAAGTTCCCTCTAATGAGGAGGATTTGGCCCAGTGGTCCTTACCTGAGGATGAGCTTGTTTTGCTTGCTATAGTTGGCATAAAGGATCCCTGTCGCCCTGGTGTCAAAGATGCAGTGGCAGTATGCACTGCAGCCGGTGTTAAGGTGCGCATGGTTACGGGGGACAATCCTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCACATTTAGATGCTGTTGAACCAGTTATCATTGAAGGAAAGACATTCCGGGCATTATCTGAAAAAGAAAGGGAACAAATCGCTAAACAAATAACAGTGATGGGGAGGTCTTCTCCAAATGACAAGCTTTTACTTGTTCAAGCACTGCGTAAAGGGGGTGAAGTTGTTGCTGTTACTGGAGATGGCACCAATGATGCTCCCGCCCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCCGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGATGATAACTTTGCGTCAGTTGTAAAGGTCGTCCGCTGGGGCCGTTCTGTCTCTGCAAATATTCAGAAATTTATACAGTTCCAGCTCACAGTTAATGTAGCAGCTCTTGCTATAAATGTTGTGGCGGCAGTTTCTTCGGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGCTTAACCTTATCATGGACACACTTGGGGCCCTGGCACTAGCAACGGAACCGCCTACGGACCACCTTATGCACAGACCACCCGTTGGTCGAAGGGAACCTCTCATAACGAATAACATGTGGAGGAACTTGCTTGTACAGGCTGTGTATCAAATTGCGGTTCTCCTTGTTCTTAATTTTGGTGGAGAAAGCATTCTCCGTGGTAACAACACCGAAGCAGAAACCATGAAACTGAAGAATACTTTGATTTTCAATGCATTCGTCCTCTGCCAAATATTCAATGAGTTCAATGCTCGAAAACCAGATCAAATAAACGTGTTCACCGGAGTGACCAAGAACCGTCTCTTTGTGGGAATTGTGGGACTGACCTTTGTACTTCAGATAATTATCATCGAGTTCCTTGGAAAGTTCACTAGCACTGTGAGGCTTGATTGGAAGATGTGGCTCGTTTCTTTTATCATTGGTATTGTCAGTTGGCCACTTGCTGTACTTGGAAAGTTCATTCCAGTTCCCAAAACACCGTTGTCCCGTACCTTCAAGAAGATGCTTATGCGATTCAAGAGATCCAAAACTCCTCCCACGCAATAG 3282 0.4455 MESSISRSANSSTNGLLSVNIPSHNDVEPLPPHQIDDDDDVVDPDDPFDITHTKNAPVESLQRWRQAALVLNASRRFRYTLDLKRGEEEEHKKGLIRAHAQVVRAALLFRLAGERDLAGGTGVSGPISGDNFGVGLEQLASMSKDQNIAALQEYGGVKGLSDLLKSDLEKGINGDDDDILKRKVTFGTNTYPKKKGRTFWMFLWDAWQDLTLIILIIAAVVSLALGIKTEGLEEGWYDGGSIAFAVFLVIIVTAASDYRQSLQFQNLNSEKQNIQLEVIRGGRATKISIFDVIVGDVVPLKIGDQVPADGVIITAHSLAIDESSMTGESKIIHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGMIGLTVAAVVLAVLLGRYFSGNTKDLNGNVQFVAGQTSISSAIDGVVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMTVVEACVGRKKLNSPDDPSKLNSEVLSLIKEGIAQNTTGTVFVPKDGGETEVSGSPTEKAILSWAVKLGMDFDLIRSNSTVLHVFPFNSEKKRGGVLLKQNVDSRVHIHWKGAAEIVLGKCTQYIDSNGSLLCIEEEKDFFKEVIEDMAARSLRCVAIAYRSYELDKVPSNEEDLAQWSLPEDELVLLAIVGIKDPCRPGVKDAVAVCTAAGVKVRMVTGDNPQTAKAIALECGILASHLDAVEPVIIEGKTFRALSEKEREQIAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAVSSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNNMWRNLLVQAVYQIAVLLVLNFGGESILRGNNTEAETMKLKNTLIFNAFVLCQIFNEFNARKPDQINVFTGVTKNRLFVGIVGLTFVLQIIIIEFLGKFTSTVRLDWKMWLVSFIIGIVSWPLAVLGKFIPVPKTPLSRTFKKMLMRFKRSKTPPTQ 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1205 1093 Gene3D - 57 110 - -
Prci13g1205 1093 SFLD C1.7: P-type atpase like 479 857 - -
Prci13g1205 1093 Gene3D - 507 705 IPR023299 GO:0000166
Prci13g1205 1093 PANTHER CATION TRANSPORTING ATPASE 110 1068 - -
Prci13g1205 1093 CDD P-type_ATPase_Ca_PMCA-like 179 938 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 56 112 - -
Prci13g1205 1093 NCBIfam HAD-IC family P-type ATPase 432 526 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g1205 1093 NCBIfam HAD-IC family P-type ATPase 771 885 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g1205 1093 NCBIfam calcium-translocating P-type ATPase, PMCA-type 144 1068 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci13g1205 1093 MobiDBLite consensus disorder prediction 1 54 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 9 plasma membrane-type 351 521 - -
Prci13g1205 1093 SUPERFAMILY HAD-like 495 910 IPR036412 -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 205 262 - -
Prci13g1205 1093 Pfam Cation transporter/ATPase, N-terminus 155 222 IPR004014 -
Prci13g1205 1093 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 1068 IPR023298 -
Prci13g1205 1093 Pfam E1-E2 ATPase 274 475 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 698 850 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 254 373 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 507 705 - -
Prci13g1205 1093 Pfam Cation transporting ATPase, C-terminus 890 1065 IPR006068 -
Prci13g1205 1093 Gene3D - 205 1059 - -
Prci13g1205 1093 FunFam Calcium-transporting ATPase 822 1070 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 321 335 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 698 709 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 829 841 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 720 730 - -
Prci13g1205 1093 PRINTS P-type cation-transporting ATPase superfamily signature 805 824 - -
Prci13g1205 1093 Pfam haloacid dehalogenase-like hydrolase 494 819 - -
Prci13g1205 1093 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g1205 1093 ProSitePatterns E1-E2 ATPases phosphorylation site. 499 505 IPR018303 -
Prci13g1205 1093 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 504 702 IPR023299 GO:0000166
Prci13g1205 1093 Gene3D - 177 373 - -
Prci13g1205 1093 SFLD p-type atpase 479 857 IPR044492 -
Prci13g1205 1093 Gene3D - 494 850 IPR023214 -
Prci13g1205 1093 SMART Cation_ATPase_N_a_2 153 227 IPR004014 -
Prci13g1205 1093 Pfam Ca2+-ATPase N terminal autoinhibitory domain 45 87 IPR024750 GO:0005516
Prci13g1205 1093 PRINTS Sodium/potassium-transporting ATPase signature 240 260 - -
Prci13g1205 1093 PRINTS Sodium/potassium-transporting ATPase signature 617 635 - -
Prci13g1205 1093 PRINTS Sodium/potassium-transporting ATPase signature 490 511 - -
Prci13g1205 1093 SUPERFAMILY Calcium ATPase, transduction domain A 275 370 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1205 Prci-Chr13 10257536 10272247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1205 9 1088 Primary Pumps ATPases AT3G21180 74.562 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1205 K01537 - gmx:100777143 1693.71