Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1190 ATGAGACCGACTCAGCTGTCGCAGGGCACCGGAACGGCCAATCAGGAGAAGCCGCGCCGACGGAAGCATCTGAGCTTGCCGTTGCCGCAGCGGGACTCATCTTTAGCGATGCCGCTTCCTCTGCCGCCGTCCAGCACGGGAAGGTCGAGTAGTCACCAATTGGTTTCGGGGTCATGTCAATCTCAGCAGCAGGTGCCATTCGTTGAGCTCGAGCGCCTCAATCGGATTGGTAGCGGCAGCGGAGGCACCGTGTATAAGGTCCGTCACCGACTCACTGGTCGTTTTTACGCGCTTAAGGTTATATACGGTACCCACGAGGAATCCGTGCGCCGTCAGATCCATCGAGAAATTCAGATCCTCCGAGACGTGAATGACCAGAACGTTGTCAAGTGCCATGACATGTACGATCATAGCGGCGAAATCCAGGTACTTCTCGAGTTCATGGACTGTGGCTCCTTGGAAGGGAAACGCATCCCCAATGAACAATACCTGGCGGACGTAGCACGCCAGATCCTCCGTGGCCTGGCCTACCTCCACCGCCGCCATATCGTCCATAGAGATATCAAGCCCTCGAACCTGTTAATCAATTCGCAGAAGCAGGTCAAGATTGCTGATTTCGGTGTGGGTCGAATTCTGGCACAAACTATGGATCCGTGTAATTCATCGGTGGGTACAATCGCTTATATGAGCCCTGAGAGAATCAATACAGACATCAATGATGGGCAATATGATGCGTATGCGGGAGATATATGGAGCCTTGGAGTGAGTATATTAGAATTCTACATGGGAAAATTCCCATTCCCGGTGGGAAGGCAAGGAGATTGGGCAAGCTTGATGTGCGCAATTTGTATGTCTCAACCACCGGAGGCGCCGCCGACGGCGTCGATGGAGTTCCGGGATTTTATATCGCGCTGTTTACAGAGAGATCCCTCGCGGAGGTGGACGGCTTCGCGCTTGTTGATGCACCCATTTATAGCTCAGGGAACAGGACACCAGAACCAAGTTCATCAGAATCTTTATCAACTTCTACCTCCGCCTTCCTAG 1044 0.5307 MRPTQLSQGTGTANQEKPRRRKHLSLPLPQRDSSLAMPLPLPPSSTGRSSSHQLVSGSCQSQQQVPFVELERLNRIGSGSGGTVYKVRHRLTGRFYALKVIYGTHEESVRRQIHREIQILRDVNDQNVVKCHDMYDHSGEIQVLLEFMDCGSLEGKRIPNEQYLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSQKQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGKFPFPVGRQGDWASLMCAICMSQPPEAPPTASMEFRDFISRCLQRDPSRRWTASRLLMHPFIAQGTGHQNQVHQNLYQLLPPPS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1190 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Prci13g1190 347 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 29 329 - -
Prci13g1190 347 SUPERFAMILY Protein kinase-like (PK-like) 71 337 IPR011009 -
Prci13g1190 347 Pfam Protein kinase domain 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1190 347 FunFam Mitogen-activated protein kinase 2 150 337 - -
Prci13g1190 347 Gene3D Transferase(Phosphotransferase) domain 1 151 341 - -
Prci13g1190 347 ProSiteProfiles Protein kinase domain profile. 70 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1190 347 CDD PKc_MAPKK_plant_like 69 325 - -
Prci13g1190 347 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Prci13g1190 347 SMART serkin_6 70 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1190 347 MobiDBLite consensus disorder prediction 39 55 - -
Prci13g1190 347 Gene3D Phosphorylase Kinase; domain 1 45 149 - -
Prci13g1190 347 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1190 Prci-Chr13 10146345 10147917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1190 1 341 MAP Kinase Kinase Gene Family AT1G51660 69.143 5.70e-168 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci13g1190 Pkinase 4.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1190 K13413 - gmx:100786390 538.11