Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1189 ATGGGTTCTGTAGAGAAGATAGACCCTGATTTTGATGAGGAGGTCCCTTTAAGCTCCTCAACAAATCCCGTGAAAGTCTATGCTTTTCAATCTGAGACAACTCGTGTGCTTTCTTCCGTGAAATTGGCCACCTCATCCATCTTCAAGCCAATAGAGATAAGACCTATCAGGAGCATATACATTGTTTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTCGGTCCCTTGGCCATATTGCTACATTATCTAACTGGAAAGCATGGATGGGTTTTCTTCTGCGCCTTAGTAGGAATCACTCCTTTAGCAGAACGTCTGGGTTACGCTACTGAGCAACTTGCATTTTTTACAGGACCAACAGTTGGGGGTTTGCTGAATGCCACATTTGGCAATGCAACTGAAATGATCATATCAATTTATGCTTTGAAAAATGGGATGATCAGGGTTGTACAACAATCTTTACTGGGTTCAATCTTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGGATTGTCCACTACCAAAAGGTTCAGGTTTTCAGCAAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCTGTGATGGGAATACTGTTTCCTGCGGTGCTTCACTTTACTCACTCAGAGGTTCACTTCGGCAAGTCAGAGGTTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAATAGCATATGCTGGCTTCCTTTTCTTTCAACTAAGAAGTCATCACAATAATTATAGTTCAGTTGAAGAGGAAGGAGATAGTAATGAAAATCCTGATGAGGAAGAAGAATGTGAATTAACTAAATGGGAGGCGATAGGCTGGCTTGCTATTTTGACAGCATGGATTTCTATTTTATCTGGATACCTTGTGGATGCCATACAGGGGGCATCTGAGTCATGGAATATGCCAGTGGCTTTCATTAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCTAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACCCTTGGAGTTGCTATTGGATCATCTACTCAGATATCTATGTTTGTGATCCCCTTTTGTGTGGTAGTTGGGTGGTGCATGGGAAAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCTACACTTTTTATCACTGTGCTTGTTGTTGCATTTATGTTGCAGTCCCTCTGA 1200 0.4142 MGSVEKIDPDFDEEVPLSSSTNPVKVYAFQSETTRVLSSVKLATSSIFKPIEIRPIRSIYIVLIKAKINMLLPFGPLAILLHYLTGKHGWVFFCALVGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYQKVQVFSKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSEVSLSRFSSCIMLIAYAGFLFFQLRSHHNNYSSVEEEGDSNENPDEEEECELTKWEAIGWLAILTAWISILSGYLVDAIQGASESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMLQSL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1189 399 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 53 397 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci13g1189 399 FunFam Vacuolar cation/proton exchanger 119 258 - -
Prci13g1189 399 Gene3D - 269 398 IPR044880 -
Prci13g1189 399 Gene3D - 119 257 IPR044880 -
Prci13g1189 399 NCBIfam calcium/proton exchanger 71 395 IPR004798 GO:0006816|GO:0015369
Prci13g1189 399 NCBIfam calcium/proton exchanger 62 397 - -
Prci13g1189 399 FunFam Vacuolar cation/proton exchanger 266 399 - -
Prci13g1189 399 Pfam Sodium/calcium exchanger protein 279 396 IPR004837 GO:0016020|GO:0055085
Prci13g1189 399 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1189 Prci-Chr13 10131676 10136942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1189 56 397 Antiporters AT3G13320 76.385 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1189 K07300 - aew:130762115 619.002