Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1188 ATGGGTTCTGTAGAGAAGATAGACCCTGATTTTGATGAGGAGGTCCCTTTAAGCTCCTCAACAAATCCCGTGAAAGTCTATGCTTTTCAATCTGAGACAACTCGTGTGCTTTCTTCCGTGAAATTGGCCACCTCATCCATCTTCAAGCCAATAGAGATAAGACCTATCAGGAGCATATACATTGTTTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTCGGTCCCTTGGCCATATTGCTACATTATCTAACTGGAAAGCATGGATGGGTTTTCTTCTGCGCCTTAGTAGGAATCACTCCTTTAGCAGAACGTCTGGGTTACGCTACTGAGCAACTTGCATTTTTTACAGGACCAACAGTTGGGGGTTTGCTGAATGCCACATTTGGCAATGCAACTGAAATGATCATATCAATTTATGCTTTGAAAAATGGGATGATCAGGGTTGTACAACAATCTTTACTGGGTTCAATCTTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGGATTGTCCACTACCAAAAGGTTCAGGTTTTCAGCAAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCTGTGATGGGAATACTGTTTCCTGCGGTGCTTCACTTTACTCACTCAGAGGTTCACTTCGGCAAGTCAGAGGTTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAATAGCATATGCTGGCTTCCTTTTCTTTCAACTAAGAAGTCATCACAATAATTATAGTTCAGTTGAAGAGGAAGGAGATAGTAATGAAAATCCTGATGAGGAAGAAGAATGTGAATTAACTAAATGGGAGGCGATAGGCTGGCTTGCTATTTTGACAGCATGGATTTCTATTTTATCTGGATACCTTGTGGATGCCATACAGGGGGCATCTGAGTCATGGAATATGCCAGTGGCTTTCATTAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCTAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACCCTTGGAGTTGCTATTGGATCATCTACTCAGATATCTATGTTTGTGATCCCCTTTTGTGTGGTAGTTGGGTGGTGCATGGGAAAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCTACACTTTTTATCACTGTGCTTGTTGTTGCATTTATGTTGCAGGAAGGGACCTCTAATTATTTCAAAGGCTTGATGCTTGTTCTATGCTATCTTATTGTTGCCGCCAGTTTCTTTGTACACGTGGACCCGGAAGACGCCGAAAACAGTGAGCACTGA 1305 0.4169 MGSVEKIDPDFDEEVPLSSSTNPVKVYAFQSETTRVLSSVKLATSSIFKPIEIRPIRSIYIVLIKAKINMLLPFGPLAILLHYLTGKHGWVFFCALVGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYQKVQVFSKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSEVSLSRFSSCIMLIAYAGFLFFQLRSHHNNYSSVEEEGDSNENPDEEEECELTKWEAIGWLAILTAWISILSGYLVDAIQGASESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLVLCYLIVAASFFVHVDPEDAENSEH 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1188 434 FunFam Vacuolar cation/proton exchanger 266 422 - -
Prci13g1188 434 NCBIfam calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
Prci13g1188 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 54 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci13g1188 434 NCBIfam calcium/proton exchanger 62 421 - -
Prci13g1188 434 Pfam Sodium/calcium exchanger protein 279 418 IPR004837 GO:0016020|GO:0055085
Prci13g1188 434 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016020|GO:0055085
Prci13g1188 434 FunFam Vacuolar cation/proton exchanger 119 258 - -
Prci13g1188 434 Gene3D - 269 422 IPR044880 -
Prci13g1188 434 Gene3D - 119 257 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1188 Prci-Chr13 10130903 10136940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1188 56 428 Antiporters AT3G13320 77.005 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1188 K07300 - mnt:21384959 670.618