Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1182 ATGAAGGACGCGGAGAAAAAGAAGTACCCCATTGGCCCTGAGCATTATGAACTGCTCGAGGAGATTGGCCAGGGGGTAAGTGCTCATGTGCACCGTGCTCGTTGCATTCCTTTTAATGAGATCATTGCCATAAAAATCCTAGATTTTGAGCGAGAAAACTGCGATCTGAATAATGTTTTTCGTGAAGCACAGACCATGACCTTGGTTGACCACCCTAACGTCCTAAAATCACACTGCTCCTTTGTTAGTGATCATAATCTGTGGGTTATCATGCCATATATGGCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCCTACCCAGATGGTTTTGAGGAGGTTGTAATAGCTACAATATTGCGAGAGGTATTGAAGGGTTTAGAGTACCTTCATCATCATGGCCATATACATAGAGATGTTAAAGCTGGGAACATTCTAATTGATGCCCGTGGTGCAATCAAGCTGGGAGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACGAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGATTTCAAAGCAGATATCTGGTCTTTTGGTATAACAGCATTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCATGAAGGTACTTCTTATGACATTGCAAAATGCACCACCTGGCCTTGATTATGAACGTGATAAGAAGTTCTCTAAGTCATTTAAGCATATGATTGCGAGCTGCTTGGTAAAAGATCCTTCAAAACGACCCACTGCAAGCAAGTTGCTAAAGAATTCCTTTTTTAAGCAAGCTCGCTCAAATGATTACATTTTGCGAAGGATTTTGGAAGGGCTGCCTAATTTAGGTGATCGCATCCAGGCCCTAAAGAGGAAAGACGAAGATATGCTTGCAAAGGAACAAATGCCTGATGGGCAGAAGGAGGAAATATCACAGAACGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATCTTGATGATATGAAAGCTCAGGCTTCATTGATACAGGATTATGATGATGCAATATCTGAAATCAATCCGGGAGGGAGTTCGAGTTCTTTTTGTACAGTTGATGTACAAGAGAAGCAATCACCACGTGCAAACCATTCTCAAATTGCTGATATGGAAGATAACGAAGAGATGCGAAATCAGTCAGCTTCTGTACCTGCAGTGGATTTCACAACAACCAGTGCCAAGGTTAGAAGTGAAAAATCTGATGACGACTCTATCACCAGTTCAAGCCATGAACACCACTTATCACGGAGTGCTTCACCGTGTCTAGAAGATCATGTGGTGGACCATAATTTGAGTGAAAAATGTGATATTGAGAATGGTGGAAGACAGGTGGAGCCTACTCATTCTTATCACAGAAGATGCTCATCAAGCATCTTACCTGAAGTTACTCACACGCCTACTCGTGGAGAAATAGAGAAGATGCCACATCTGTCCCATAGCGTTTCAAATTGCAATGCAACAACAGTACCACTGTCAGGAGAAGCAGCTAATTTGGATGACACTGATGAGAAAGTAAAGGTACCAGTGGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGAGTTAGAAAAGGTGGGCCCAACTCCTATTCTGCAAAAGAGTCAAAGCATGCAGGTTATTAGCTCTCACAATGTAACTCCTCTACCTTCAATTTTACCACTGCCACCGACATCTGAGGCTGCCTCATCAAATCCTTCTGGTTCTTCGCTTTACCAGTTATTGCATTGTGCGTTGCAAGCAAATATTGAACAAAGGGACACCATCTTACTTTTAATGAAACATGTAGTTGCTGGTGATCCTACAGTTGATGGGGCATCTAACCAAGCACTGCCTTCGGCTATGGAGAAATCTTTGCTTGAAGCATCTCATGAGAAAGAGAAAGAGCTACTTCATGAAATAACGGAGCTGCACAAGAGGCTCCAAAGTGCCCAGGATGAGATTAAGAAGTTGAAATCAGAAAACGGCCAGGTGTGA 2046 0.4306 MKDAEKKKYPIGPEHYELLEEIGQGVSAHVHRARCIPFNEIIAIKILDFERENCDLNNVFREAQTMTLVDHPNVLKSHCSFVSDHNLWVIMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKHMIASCLVKDPSKRPTASKLLKNSFFKQARSNDYILRRILEGLPNLGDRIQALKRKDEDMLAKEQMPDGQKEEISQNEYKRGISSWNFNLDDMKAQASLIQDYDDAISEINPGGSSSSFCTVDVQEKQSPRANHSQIADMEDNEEMRNQSASVPAVDFTTTSAKVRSEKSDDDSITSSSHEHHLSRSASPCLEDHVVDHNLSEKCDIENGGRQVEPTHSYHRRCSSSILPEVTHTPTRGEIEKMPHLSHSVSNCNATTVPLSGEAANLDDTDEKVKVPVVQQRGRFKVTSENVELEKVGPTPILQKSQSMQVISSHNVTPLPSILPLPPTSEAASSNPSGSSLYQLLHCALQANIEQRDTILLLMKHVVAGDPTVDGASNQALPSAMEKSLLEASHEKEKELLHEITELHKRLQSAQDEIKKLKSENGQV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1182 681 Gene3D Transferase(Phosphotransferase) domain 1 97 331 - -
Prci13g1182 681 Coils Coil 650 681 - -
Prci13g1182 681 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Prci13g1182 681 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Prci13g1182 681 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Prci13g1182 681 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1182 681 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 675 IPR047173 GO:0043539
Prci13g1182 681 MobiDBLite consensus disorder prediction 415 442 - -
Prci13g1182 681 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Prci13g1182 681 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1182 681 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1182 681 MobiDBLite consensus disorder prediction 365 387 - -
Prci13g1182 681 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Prci13g1182 681 MobiDBLite consensus disorder prediction 398 414 - -
Prci13g1182 681 CDD STKc_OSR1_SPAK 14 277 - -
Prci13g1182 681 MobiDBLite consensus disorder prediction 365 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1182 Prci-Chr13 10063801 10073317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1182 5 663 MAP Kinase Kinase Kinase Kinase AT1G79640 61.290 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Prci13g1182 Pkinase 1.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1182 K08835 - gmx:100780339 989.949