Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1174 ATGGCGAAGATGTCACAGAGGAAGGTGAAGAACGCTGAAAATGGCAGCACGACTTCAAAGACGAAGACGAAGCGGACTCGCAAAAGCATTCCCAGAGACTCTCCTTCCCAACGGAGCTCCGTTTATCGGGGTGTTACAAGGCATCGTTGGACGGGTCGGTATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGTGTATTTAGGGGCATATGATGATGAAGAAGCTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATCCTCAATTTTCCTCTTACAAGTTATGAAGAAGAGCTCAAGGAGATGGAGGGTCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCTCGAGGAGTCTCAAAGTATAGAGGCGTAGCAAGGCACCATCATAATGGAAGATGGGAGGCTCGAATCGGCAGAGTCTTCGGCAACAAATATCTTTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACGGCATATGACATGGCAGCCATAGAGTACAGAGGACTCAACGCCGTTACAAACTTTGACCTCAGCCGTTACATCAATTGGCTCCCTCCTAAAGCCCAGGACTCTCCTGAAAACCCCACAAGTGATCACAGCACTGAGTCAGGAACAAACCCTAAGCCTGAGCTTGAATTAGGTTTTGTGTCCCACCAGCTCAATTCAAACTCTGGTGAGACAATGGTGGCCCCACCACGATCCAGCGGTGGCGCTCCGTCATCATCTGCACTAGGGCTTCTCTTGCAATCATCAAAGTTCAAGGAAATGCTGGAGAGGACTTCAGCTGGAGACCATAATTACTCTGCAACAGCAACTTCAGAATCAAAGCCTCCTCGTCGTACATTTCCTGAAGATATTCAGACATTCTTTGATTGTCATGATTCAAGCAGCTATACTGAAACTGATGACATCATATTTGGTGATTTGTGCTCGATTGCTGCTCCAATTTTCCATTGTGAGCTTGATGCTTAG 1047 0.469 MAKMSQRKVKNAENGSTTSKTKTKRTRKSIPRDSPSQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLTSYEEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYINWLPPKAQDSPENPTSDHSTESGTNPKPELELGFVSHQLNSNSGETMVAPPRSSGGAPSSSALGLLLQSSKFKEMLERTSAGDHNYSATATSESKPPRRTFPEDIQTFFDCHDSSSYTETDDIIFGDLCSIAAPIFHCELDA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1174 348 MobiDBLite consensus disorder prediction 210 236 - -
Prci13g1174 348 ProSiteProfiles AP2/ERF domain profile. 41 107 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 SMART rav1_2 41 113 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 SUPERFAMILY DNA-binding domain 40 108 IPR016177 GO:0003677
Prci13g1174 348 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 FunFam AP2-like ethylene-responsive transcription factor 40 109 - -
Prci13g1174 348 MobiDBLite consensus disorder prediction 1 44 - -
Prci13g1174 348 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 Pfam AP2 domain 40 99 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 Pfam AP2 domain 142 193 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 259 - -
Prci13g1174 348 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Prci13g1174 348 MobiDBLite consensus disorder prediction 286 306 - -
Prci13g1174 348 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Prci13g1174 348 MobiDBLite consensus disorder prediction 288 302 - -
Prci13g1174 348 FunFam AP2-like ethylene-responsive transcription factor 142 203 - -
Prci13g1174 348 MobiDBLite consensus disorder prediction 214 232 - -
Prci13g1174 348 MobiDBLite consensus disorder prediction 247 266 - -
Prci13g1174 348 Gene3D AP2/ERF domain 41 109 IPR036955 GO:0003700|GO:0006355
Prci13g1174 348 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1174 Prci-Chr13 10026836 10030349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1174 37 205 AP2-EREBP Transcription Factor Family AT5G57390 73.373 7.02e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci13g1174 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1174 K09285 - pop:18097139 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1174 13 10026836 10030349 Prci13g1174 13 10026836 10030349 ECH