Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1165 ATGACTGTATCACTATCAAGGAGCTTTTTCAACATACTCAACATGGTTTTCATCGGGGCATTATTGTTCATCTTCCTACTTCAACACCCAGTTTCAATATTTAGTCTCACCTATCCTAGGGATCACCATCCTTCTCATTCCCTTCTCACAGATAAGGATGCTCTTCTGGAGTTCAAGAAAACAATTATATTTGATCCACATTCCACACTTTCTAACTGGGATGAAGCTGTTCATGTGTGTAATTTCACTGGTATTAAATGCGATAAATTTCAGCACCGAGTTACTGAACTGATCCTCGCCGAAACTCATCTTGTGGGGTTGCTTTCACCCTTCCTTTCCAATCTCACTGGACTGCACACCCTTGACATTGTTGACAATCAATTATTTGGCAATATTCCACCAGAACTTTGCTCCCTTAGTCGCCTCCATAGACTCCATCTTGAGGGGAACAATTTGCATGGTTGCATACCAGACTCCTTTTCCCAGCTTTCCAGACTTAATGTGCTGCATATCAAAGATAACAACATAACTGGTTCACTTTCACCATCTCTTTTCTCCAATTGCACACTAGAAATTGTGGACCTTTCTAGCAACTTCCTCAGTGGTAAGATCCCTGAAGAGATTGGAAACTGTCCAGGTCTGCTGAGTCTCAATCTATACAACAATCAATTTACTGGACGGATTCCTCTCTCTCTTACTAATCTGTCACTTGTAAACTTAGATGTAGAGTACAATCTATTGTCTGGAGAATTGCCCTTAGAGTTTGTCAGCAGTTGTCCTGAACTTCTTTACCTACATTTGTCATACAACTATATGGTAAGTCATGATCATAATACCAATCTTGATCGATTTTTTGCTGCTCTTAGAAACTGCAGCAGTCTAGAGGAGCTTGAATTGGCTGGCATGGGCCTTGGAGGAACGTTCTCCAATACCGTTAGTCAAGTTGGCATAAAACTAAAAAGTTTACTGCTGCAGGAAAACCAAATATATGGATCGATCCCTGACAGTGTATCAAAACTTTCCAGCCTTATGATACTAAATTTAACATCTAATCTTCTCAATGGAACTATTTCACCGGAGATCAGCAAGTTGTCAAACTTGGAACAACTTTTCTTATCAAACAACCACTTCAAAACTGCAATTCCAGAAGCACTGGGCAACTGTCTAAATCTGGGTCTGCTGGATCTGTCGCACAATGAATTTTCAGGAGGGATTCCAGAAAGTCTGGGAAAGTTGGGACGACTAAATTCTTTGTTTCTCAACAATAACCATCTGACTGGGAAAGTACCTTCTACAATAGGCCAGTGCATTGGTCTATATAGGCTTGACCTGTCTTATAATAGGTTATCAGGAAGCATCCCACCAGAACTCACAGGCCTGCATGAAATTAGAATTTTCATAAACCTCTCAAATAACCAACTAGAAGGTCCCCTGCCAATTGAGCTCAGCAAGCTAGAAAAGGTTCAAGAGATGGATTTTTCGTCAAATTACCTAATAGGAAATATCTTCCCCCAGATAGCAAGCTGCATTGCTGTATCGATGATTAATTTTTCAAACAATTTTCTACAAGGTGAGCTTCCCGAATCCTTAGGTGAACTGAAGAACCTCGAAACTTTTGATGTTTCACAAAACAAATTGTCTGGATTGATCCCCAAAACTCTTGGTAAAATTGATACACTTTCTTTCCTCAATCTATCATATAACAATCTGCAAGGAATGGTTCCATCTGGTGGTATCTTTGATTCATCGTCAAATTTATCATTCTTAGGAAACCCACATCTTTGTGGAACAATTACAGGCAAACTATCATGCTTTGAAAAGAGACATTGGTTCAGAAATCGCCTATTCTTAATTATTTTCATCTTGGTCATCTTCATAATCTTGTCAATGATTTTCTGCATAATTGGATTTAAGTGTCTTGAAGTGATTATTTCCAGCCAGGGAACTGACTTAGCTGGCAAACCAGCTAAGCGTGAACTAATAAGTAACTTCCCAAGAATCACATACCAGGAACTTGCAGATGCCACTGGAGGATTTGATGATCAGAGACAAGTAGGATCAGGTAGCTATGGACGTGTCTACAGAGGAGTTCTTCCAGATGGAACACCAATAGCAGTCAAGGTGCTGCATTTGAAATCTGGAAATTCCATCAAGAGGTTCAACAGAGAATGCCAAGTTTTAAAGAGGATTCGGCACAGGAACCTGATAAGGATTATCACTGCATGTAGTCTACCTGAATTTAAGGCTCTTGTTTTGCCTTATATGGCTAATGGGAGTTTGGAGAGCCGCCTCTATGCTTCTCCTGGATCTTCTGATTTGAGTATCACCCAGAGGGTGAATATTTGCAGTGACATAGCAGAAGGGATGGCCTATCTGCATCATCATTCTCCAGTCAAAGTCATTCATTGTGACCTAAAACCAAGCAATGTTCTTCTTAATGATGACATGACAGCTGTAGTTTCAGATTTTGGGATTGCAAGGTTAATTATGAGTGTTGGAGGAGGAAATAATGGGTTTAATGATAACATGGGGAGCTCCACTGCAAATTTGTTATGCGGGTCTATCGGATACATTGCACCAGAGTACGGATTTGGATCAAATATATCAACAAAAGGAGATGTGTACAGCTTTGGTATTCTAGTTCTTGAGATGATGACTAGAAAAAGACCAACAGATGACATATTTTCTGGTGGCTTAAGCCTGCACAAATGGGTAAAATTTCATTATCATGGAAGGTTAGAGAAAGTGATAGACCCTGTCTTGGTTACTGCTTCAAGAGATCAGTCTCATGAGGTAAAAAGAATGCAAGGAGTCGCAATTGGAGAGCTAATTGAGCTGGGGATCCTTTGCACACAGGAATCACCATCTACAAGGCCTAGCATGCTTTATGTAGCCGATGACTTGGATCGTCTCAAGAGATACCTTACTGGGGATATAACTAGGACTTTTGCCTCATCTCTTGGAATTTCATCTTCTACTACAGATGATTTTTGA 2994 0.4011 MTVSLSRSFFNILNMVFIGALLFIFLLQHPVSIFSLTYPRDHHPSHSLLTDKDALLEFKKTIIFDPHSTLSNWDEAVHVCNFTGIKCDKFQHRVTELILAETHLVGLLSPFLSNLTGLHTLDIVDNQLFGNIPPELCSLSRLHRLHLEGNNLHGCIPDSFSQLSRLNVLHIKDNNITGSLSPSLFSNCTLEIVDLSSNFLSGKIPEEIGNCPGLLSLNLYNNQFTGRIPLSLTNLSLVNLDVEYNLLSGELPLEFVSSCPELLYLHLSYNYMVSHDHNTNLDRFFAALRNCSSLEELELAGMGLGGTFSNTVSQVGIKLKSLLLQENQIYGSIPDSVSKLSSLMILNLTSNLLNGTISPEISKLSNLEQLFLSNNHFKTAIPEALGNCLNLGLLDLSHNEFSGGIPESLGKLGRLNSLFLNNNHLTGKVPSTIGQCIGLYRLDLSYNRLSGSIPPELTGLHEIRIFINLSNNQLEGPLPIELSKLEKVQEMDFSSNYLIGNIFPQIASCIAVSMINFSNNFLQGELPESLGELKNLETFDVSQNKLSGLIPKTLGKIDTLSFLNLSYNNLQGMVPSGGIFDSSSNLSFLGNPHLCGTITGKLSCFEKRHWFRNRLFLIIFILVIFIILSMIFCIIGFKCLEVIISSQGTDLAGKPAKRELISNFPRITYQELADATGGFDDQRQVGSGSYGRVYRGVLPDGTPIAVKVLHLKSGNSIKRFNRECQVLKRIRHRNLIRIITACSLPEFKALVLPYMANGSLESRLYASPGSSDLSITQRVNICSDIAEGMAYLHHHSPVKVIHCDLKPSNVLLNDDMTAVVSDFGIARLIMSVGGGNNGFNDNMGSSTANLLCGSIGYIAPEYGFGSNISTKGDVYSFGILVLEMMTRKRPTDDIFSGGLSLHKWVKFHYHGRLEKVIDPVLVTASRDQSHEVKRMQGVAIGELIELGILCTQESPSTRPSMLYVADDLDRLKRYLTGDITRTFASSLGISSSTTDDF 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1165 997 Pfam Leucine rich repeat N-terminal domain 50 88 IPR013210 -
Prci13g1165 997 Gene3D Ribonuclease Inhibitor 162 237 IPR032675 -
Prci13g1165 997 Gene3D Ribonuclease Inhibitor 50 161 IPR032675 -
Prci13g1165 997 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 319 608 - -
Prci13g1165 997 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Prci13g1165 997 FunFam Leucine-rich repeat receptor-like protein kinase 49 206 - -
Prci13g1165 997 Gene3D Transferase(Phosphotransferase) domain 1 755 982 - -
Prci13g1165 997 ProSiteProfiles Protein kinase domain profile. 679 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1165 997 SUPERFAMILY L domain-like 49 273 - -
Prci13g1165 997 SMART serkin_6 679 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1165 997 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Prci13g1165 997 Pfam Leucine rich repeat 318 377 IPR001611 GO:0005515
Prci13g1165 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Prci13g1165 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 659 754 - -
Prci13g1165 997 CDD STKc_IRAK 685 971 - -
Prci13g1165 997 Pfam Protein kinase domain 680 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1165 997 Gene3D Ribonuclease Inhibitor 238 610 IPR032675 -
Prci13g1165 997 Gene3D Phosphorylase Kinase; domain 1 660 754 - -
Prci13g1165 997 SMART LRR_typ_2 412 436 IPR003591 -
Prci13g1165 997 SMART LRR_typ_2 139 162 IPR003591 -
Prci13g1165 997 SMART LRR_typ_2 163 187 IPR003591 -
Prci13g1165 997 SMART LRR_typ_2 533 556 IPR003591 -
Prci13g1165 997 SMART LRR_typ_2 364 388 IPR003591 -
Prci13g1165 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 755 981 - -
Prci13g1165 997 SUPERFAMILY L domain-like 318 596 - -
Prci13g1165 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 403 968 - -
Prci13g1165 997 SUPERFAMILY Protein kinase-like (PK-like) 659 968 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1165 Prci-Chr13 9947921 9951558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1165 50 973 Receptor kinase-like Gene Family AT3G47570 33.567 6.36e-156 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci13g1165 Pkinase 6.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1165 - - pcin:129291644 1905.18