Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1162 ATGTGTGCGCGGTTCAATGTTGGCTTTTTGTGTTGTAGCAGTTGGAGATGGGGGCATACCTTAGCAGTCCGAAAACAGAAAAGACCTCTGAAGATGGCGAGAATGACAGGCTTCGCTATGGGTTATCTTCCATGCAAGGGTGGCGTAAAACTATGGAAGATGCTGTCTCATGCTGCCCATCCTGATTTGGACGAGTCTACATCTTTGTTTGGTGTTTATGATGGTCATGGAGGTAAAGCAGTCGCTAAATTCTGTGCCAAGTATCTACACCAACAGGTGCTTGAGCATGAAGTTTATTTAGCTGGAGATTTAGGCACATCTTTACAACACTCATTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGAAAAATCAAAAAGGCTTTTTAATATGAGATGTTGGTTTATAAGGACTCCAAAGAGTGGTTCAGTCAATGGCCATGTTGATGACTGGGCTTTTGAAGAGGTAACTAATAAGAATGACATACCACAGGGGCCCCATTGTGGTTTCAGGGTACCAAAGGCAGGATGCACAGCTTGTGTTGCAGTCATCCGAGGCAACCATCTTCTTGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGCCAGGCACAAAATTTAACTAAAGATCACAAGCCTGACCTCGAGGTTGAAAAATACAGGATTCTAAAAGCTGGTGGTTTTATACAATTTGGACGTGTCAATGGATGTTTAAACTTGACTAGTGCAATTGGAGATATTGAATTCAAGGAAAACAAGCTTTTGCCTGCGGACAAGCAGATGGTAACTGCTGATCCAGAGTTAACTTATGTTGAGCTTTGCAATGATGATGAGTTTCTCGTTATAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACATCTTGTGGATTTCATACATGAACAGTCAAGGACAGAAAACAATCTAAAAGTGATCTGTGAGAGAGTATTGGATTGGTGCTTGGCACCAGCAGCCGGTGGTTTGGGATGTGACAACATGACCATGATCTTGATTCTGTTCAAAGGGCCAAATTCAGGTGCTTCTGTCATTAACTAA 1098 0.4281 MCARFNVGFLCCSSWRWGHTLAVRKQKRPLKMARMTGFAMGYLPCKGGVKLWKMLSHAAHPDLDESTSLFGVYDGHGGKAVAKFCAKYLHQQVLEHEVYLAGDLGTSLQHSFLRMDEMMRGQRGWRELAVLGEKSKRLFNMRCWFIRTPKSGSVNGHVDDWAFEEVTNKNDIPQGPHCGFRVPKAGCTACVAVIRGNHLLVANAGDSRCVLSRKGQAQNLTKDHKPDLEVEKYRILKAGGFIQFGRVNGCLNLTSAIGDIEFKENKLLPADKQMVTADPELTYVELCNDDEFLVIACDGIWDCMSSQHLVDFIHEQSRTENNLKVICERVLDWCLAPAAGGLGCDNMTMILILFKGPNSGASVIN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1162 365 SMART PP2C_4 29 352 IPR001932 -
Prci13g1162 365 CDD PP2Cc 56 354 IPR001932 -
Prci13g1162 365 ProSiteProfiles PPM-type phosphatase domain profile. 48 354 IPR001932 -
Prci13g1162 365 Gene3D - 45 355 IPR036457 -
Prci13g1162 365 Pfam Protein phosphatase 2C 183 339 IPR001932 -
Prci13g1162 365 Pfam Protein phosphatase 2C 62 120 IPR001932 -
Prci13g1162 365 PANTHER PROTEIN PHOSPHATASE 2C 57 351 IPR015655 GO:0004722|GO:0006470
Prci13g1162 365 SUPERFAMILY PP2C-like 59 357 IPR036457 -
Prci13g1162 365 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1162 Prci-Chr13 9897515 9903797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1162 56 358 PP2C-type Phosphatase Gene Family AT2G25070 64.474 1.46e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1162 K17499 - gmx:100499713 458.373