Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1161 ATGGGGGCATACCTTAGCAGTCCGAAAACAGAAAAGACCTCTGAAGATGGCGAGAATGACAGGCTTCGCTATGGGTTATCTTCCATGCAAGGGTGGCGTAAAACTATGGAAGATGCTCATGCTGCCCATCCTGATTTGGACGAGTCTACATCTTTGTTTGGTGTTTATGATGGTCATGGAGGTAAAGCAGTCGCTAAATTCTGTGCCAAGTATCTACACCAACAGGTGCTTGAGCATGAAGTTTATTTAGCTGGAGATTTAGGCACATCTTTACAACACTCATTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGAAAAATCAAAAAGGCTTTTTAATATGAGATGTTGGTTTATAAGGACTCCAAAGAGTGGTTCAGTCAATGGCCATGTTGATGACTGGGCTTTTGAAGAGGTAACTAATAAGAATGACATACCACAGGGGCCCCATTGTGGTTTCAGGGTACCAAAGGCAGGATGCACAGCTTGTGTTGCAGTCATCCGAGGCAACCATCTTCTTGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGCCAGGCACAAAATTTAACTAAAGATCACAAGCCTGACCTCGAGGTTGAAAAATACAGGATTCTAAAAGCTGGTGGTTTTATACAATTTGGACGTGTCAATGGATGTTTAAACTTGACTAGTGCAATTGGAGATATTGAATTCAAGGAAAACAAGCTTTTGCCTGCGGACAAGCAGATGGTAACTGCTGATCCAGAGTTAACTTATGTTGAGCTTTGCAATGATGATGAGTTTCTCGTTATAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACATCTTGTGGATTTCATACATGAACAGTCAAGGACAGAAAACAATCTAAAAGTGATCTGTGAGAGAGTATTGGATTGGTGCTTGGCACCAGCAGCCGGTGGTTTGGGATGTGACAACATGACCATGATCTTGATTCTGTTCAAAGGGCCAAATTCAGGTGCTTCTGTCATTAACTAA 1047 0.426 MGAYLSSPKTEKTSEDGENDRLRYGLSSMQGWRKTMEDAHAAHPDLDESTSLFGVYDGHGGKAVAKFCAKYLHQQVLEHEVYLAGDLGTSLQHSFLRMDEMMRGQRGWRELAVLGEKSKRLFNMRCWFIRTPKSGSVNGHVDDWAFEEVTNKNDIPQGPHCGFRVPKAGCTACVAVIRGNHLLVANAGDSRCVLSRKGQAQNLTKDHKPDLEVEKYRILKAGGFIQFGRVNGCLNLTSAIGDIEFKENKLLPADKQMVTADPELTYVELCNDDEFLVIACDGIWDCMSSQHLVDFIHEQSRTENNLKVICERVLDWCLAPAAGGLGCDNMTMILILFKGPNSGASVIN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1161 348 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g1161 348 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Prci13g1161 348 Pfam Protein phosphatase 2C 166 322 IPR001932 -
Prci13g1161 348 PANTHER PROTEIN PHOSPHATASE 2C 16 334 IPR015655 GO:0004722|GO:0006470
Prci13g1161 348 SUPERFAMILY PP2C-like 3 340 IPR036457 -
Prci13g1161 348 CDD PP2Cc 23 337 IPR001932 -
Prci13g1161 348 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Prci13g1161 348 Gene3D - 1 338 IPR036457 -
Prci13g1161 348 SMART PP2C_4 13 335 IPR001932 -
Prci13g1161 348 ProSiteProfiles PPM-type phosphatase domain profile. 23 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1161 Prci-Chr13 9897515 9903881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1161 1 341 PP2C-type Phosphatase Gene Family AT2G25070 67.251 4.80e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1161 K17499 - gmx:100499713 526.939