Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1157 ATGGCGAGAATGACAGGCTTCGCTATGGGTTATCTTCCATGCAAGGGTGGCGTAAAACTATGGAAGATGCTGTCTCATGCTGCCCATCCTGATTTGGACGAGTCTACATCTTTGTTTGGTGTTTATGATGGTCATGGAGGTAAAGCAGTCGCTAAATTCTGTGCCAAGTATCTACACCAACAGGTGCTTGAGCATGAAGTTTATTTAGCTGGAGATTTAGGCACATCTTTACAACACTCATTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGAAAAATCAAAAAGGCTTTTTAATATGAGATGTTGGTTTATAAGGACTCCAAAGAGTGGTTCAGTCAATGGCCATGTTGATGACTGGGCTTTTGAAGAGGTAACTAATAAGAATGACATACCACAGGGGCCCCATTGTGGTTTCAGGGTACCAAAGGCAGGATGCACAGCTTGTGTTGCAGTCATCCGAGGCAACCATCTTCTTGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGCCAGGCACAAAATTTAACTAAAGATCACAAGCCTGACCTCGAGGTTGAAAAATACAGGATTCTAAAAGCTGGTGGTTTTATACAATTTGGACGTGTCAATGGATGTTTAAACTTGACTAGTGCAATTGGAGATATTGAATTCAAGGAAAACAAGCTTTTGCCTGCGGACAAGCAGATGGTAACTGCTGATCCAGAGTTAACTTATGTTGAGCTTTGCAATGATGATGAGTTTCTCGTTATAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACATCTTGTGGATTTCATACATGAACAGTCAAGGACAGAAAACAATCTAAAAGTGATCTGTGAGAGAGTATTGGATTGGTGCTTGGCACCAGCAGCCGGTGGTTTGGGATGTGACAACATGACCATGATCTTGATTCTGTTCAAAGGGCCAAATTCAGGTGCTTCTGTCATTAACTAA 1005 0.4239 MARMTGFAMGYLPCKGGVKLWKMLSHAAHPDLDESTSLFGVYDGHGGKAVAKFCAKYLHQQVLEHEVYLAGDLGTSLQHSFLRMDEMMRGQRGWRELAVLGEKSKRLFNMRCWFIRTPKSGSVNGHVDDWAFEEVTNKNDIPQGPHCGFRVPKAGCTACVAVIRGNHLLVANAGDSRCVLSRKGQAQNLTKDHKPDLEVEKYRILKAGGFIQFGRVNGCLNLTSAIGDIEFKENKLLPADKQMVTADPELTYVELCNDDEFLVIACDGIWDCMSSQHLVDFIHEQSRTENNLKVICERVLDWCLAPAAGGLGCDNMTMILILFKGPNSGASVIN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1157 334 PANTHER PROTEIN PHOSPHATASE 2C 31 320 IPR015655 GO:0004722|GO:0006470
Prci13g1157 334 Gene3D - 18 324 IPR036457 -
Prci13g1157 334 Pfam Protein phosphatase 2C 152 308 IPR001932 -
Prci13g1157 334 Pfam Protein phosphatase 2C 31 89 IPR001932 -
Prci13g1157 334 SMART PP2C_4 2 321 IPR001932 -
Prci13g1157 334 ProSitePatterns PPM-type phosphatase domain signature. 38 46 IPR000222 GO:0043169
Prci13g1157 334 SUPERFAMILY PP2C-like 28 326 IPR036457 -
Prci13g1157 334 CDD PP2Cc 25 323 IPR001932 -
Prci13g1157 334 ProSiteProfiles PPM-type phosphatase domain profile. 17 323 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1157 Prci-Chr13 9897515 9903895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1157 25 327 PP2C-type Phosphatase Gene Family AT2G25070 64.474 2.10e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1157 K17499 - gmx:100499713 458.373