Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1152 ATGGCAGACCTCAAAGAGCGGCTGTTACTTCCTCCAAAACCAGCATCAGCTCTTAATTTGAGAGAGTCAGTCAATCGGCCAACAGCATCTGGAAGGCAACCCTTGCAAGGGGTGGATGTTTTGGGGCTAAAGAAGCGGGGTCAGGGTCTTCGATCATGGATTCGTGTTGACACATCTGGAAACTCCCAGGTTATTGAAGTTGACAAGTTTACTATGATGCGACGGTGTGATCTACCTGCACGTGATCTTCGCCTGCTAGATCCTTTGTTTGTGTATCCATCAACAATCTTGGGAAGAGAAAAGGCTATTGTTGTAAATCTTGAGCAGATAAGGTGTATTATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTAGATAGTTATGTATTACACTATGTGATGGAGTTGCAACGTCGGCTAACTACTGCTGGGGTAGGTGAGGTTTGGCAGTCAGATAATTCTGACATGAACCGAAGAAGAGGAAGTAGGAATTTTGACAATGCCTTTAACAACACATCCCCTGATTATCTGCCTTTTGAGTTCAGGGCTCTTGAAGTTGCCTTGGAGTCAGCATGCACATTTCTTGACTCTCAGGCAGCAGAGTTGGAAATTGAAGCATATCCTTTACTGGATGAGTTAACGTCAAAGATCAGTACATTAAATTTGGAACGGGTTCGTCGCTTGAAAAGTAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGATGGTGATATGGCTGAAATGTACCTCACAGAGAAGAAAAGTCGGATGGAGTCATCATTTTTTGGAGATCATCAGTCTTCGATGGGATATAAATCAATTGATGCCGCATCAATTTCTGCCCCAGTTTCTCCTGTTTCTTCACCTCCTGATGCTCGAAAGCTTGAGAAATGCTTAAGCATTGCAAGGAGTCGGCATGAAAGCATGAAAAGTACAGAAAGTGCTACAGACAGTATAGAAGAGCTTGAGATGTTGCTGGAAGCTTACTTTGTTGTAATTGACAGCACCTTGAACAAATTGACATCGTTGAAAGAGTACATTGATGACACAGAAGATTTCATAAACATCCAGCTAGACAATGTACGCAATCAGTTGATCCAATTTGAGCTTTTACTCACAACGGCAACATTTGTGGTTGCCATTTTTGGTGTGGTAGCCGGAATATTTGGGATGAACTTTGAAATCGCATTATTTGATGTACCCTATGCATTCAACTGGGTCCTTATAATTACAGGAATTTGTGGGGTCTTGATATTTTCTGCCTTTGTGTGGTTCTTCAAATACAGAAGGCTCATGCCCCTATAG 1338 0.4223 MADLKERLLLPPKPASALNLRESVNRPTASGRQPLQGVDVLGLKKRGQGLRSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTAGVGEVWQSDNSDMNRRRGSRNFDNAFNNTSPDYLPFEFRALEVALESACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMESSFFGDHQSSMGYKSIDAASISAPVSPVSSPPDARKLEKCLSIARSRHESMKSTESATDSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIALFDVPYAFNWVLIITGICGVLIFSAFVWFFKYRRLMPL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1152 445 CDD Mrs2_Mfm1p-like 53 442 IPR039204 -
Prci13g1152 445 Pfam CorA-like Mg2+ transporter protein 333 433 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci13g1152 445 Coils Coil 225 252 - -
Prci13g1152 445 Gene3D Magnesium transport protein CorA, transmembrane region 131 376 - -
Prci13g1152 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 21 443 IPR039204 -
Prci13g1152 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 443 - -
Prci13g1152 445 FunFam Magnesium transporter MRS2-1 41 124 - -
Prci13g1152 445 FunFam Magnesium transporter MRS2-1 383 443 - -
Prci13g1152 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 435 IPR045863 -
Prci13g1152 445 Gene3D - 40 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1152 Prci-Chr13 9850296 9854156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1152 1 445 MRS2 Gene Family AT1G16010 85.202 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1152 K16075 - gmx:100801387 765.377