Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1150 ATGAGAATATCCAATAAAGAAATTGAGGAACGCCCGAAGCTCCCCCAAGTTTTAACTTTACCTTTTTCTTCTTCATCCGTTAATGTGATCAATATCCATAAAAGCTTCAAGCTCGAGAGAACCCAGAAGTTGAGTTCACATTTCACAGTCACACTCATCACCATGCCTTCCAGATCTTTCCCTTCCAGTCCCAACCCTCCAAGTCCGAGTTTTTTCATTAAAACCAGAGTCATCTTCCTTGCCCTCACAATCTCAGCCTCTGTTGTAATTTTATGCTCGATCATCTACTTTCTTTACCACTTATGGTATTCGATAGTGCATAGAGCTAAAACCATTCCATTTGATGCGAGTGCTCCTTTGAAGCTCGAGAGATTCTCATACAAAGAATTGAAGCAAGCCACCAATGGGTTTGACGCCGCCAATGTTATTGGTAAAGGAGGTTCTGGAACTGTCTTCAAAGGAACACTTAAAGATGGGAAATTGATTGCAATTAAGAGGTTAGACGCCTTATCTTTGCAGACAGAGAGAGAGTTTCAGAATGAGCTTCAGATTCTGGGTGGCTTAAGATCTGCTTTTATTGTGACCCTTTTGGGGTATTGTGTTGAAAAGAACAAGAGAGTGTTGGTGTATGATTACATGCCCAATAAAAGCTTGCAGGAGTCTCTATTTGGAGATGATGGGTGTTTGAGTTTGAGCTGGGAGAGGAGGTTCCACATCATTCTAGATGTTTCTAGAGCTCTGGAATTCTTGCACCTTGGCTGTGACCCACCAGTGATTCATGGTGATGTTAAGCCAAGCAATGTTCTTCTTGATTCAGAGTTTCGTGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAGTTTGGTGTAGATTTGTTTAGCCAAGATTTGGGAAGGAGCCAAGAGCTATGGAAGAGCCAAGAGCTTTCAGGTAATTTAACTACTGAAACTCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTTAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCGTCTTCTTCATCTAAAAATAGCAAGACATGTTTCAATGTTAAAACTTTGAACTTGAGTTCCTTCAATTATAATGCCAATATTGCCCATGAAAGCGAAATCAGGACTTGTAATGCAAAGGGAAAGGAAATATCAACTCTAGATATTGGTGGAGATGATTGGAACCAGAAATTTGTTCCTTATGATGATGAGTTTTCTAGCATTGATCACAGTAAGGAATTAAGTACTGTAAATGCTTCTTCTGTGGATGAGGAAAAGATAAATGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAAGATGGAACTGATGAATTATGTAGTAGAGACTATGTGATGGAGTGGATAGGAAGTCAAATTTGTCCATCAAATCCAGATTGGGTAGAAGAAAAGAAGAACATTAATGAAAAAGCAGAGTTGAAACTTCAAGTCCAACAGATCATAAAGCAGATGAAGCAAATGGACCTCAATTACAAGCATTTGGAGTAGAAGATACAGATAATGTGGTTAGAAGAAAGAAGCAAAGGGAAAGAAGAATCGAAAGAAAAGCCGAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCACCTTGCTGAACTAAGCAAGAAGAGCAGTAAGCTGAAAAATCTTCAAACCAAGTTGCAAAAAGGCTTCAAAGTGCCACATTTTGACTTGGGAAGAAGGTTTTATCTTTGCAGGCGAAGAAACTTTGCTGAAGAGGCTCAGGATGAGAGCGATCAGAATGGGGAGTTCAGTTTCAGAAGAGGTTGGAGGAAGAAGAGTACTCGCTCCATTGGTAGTGACATGTGGAGTGGAGATCTTTTCAGCCGGGAGCTCAGTAGCACAACCAGCATGAGAGGAACACTCTGTTATGTTGCACCGGAATATGGAGGGTGTGGATACTTAATGGAGAAAGCTGATATTTATAGTTTAGGAGTTTTGATCCTTGTGATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCGTCTCCCATGAAGCTTGAGAAAGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATAATGGTAACATTTTAGAGCTAGTAGATGAGAGACTGAGAGATTACAACAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCATGCTTACAGAAAATTCCAGAATTGAGGCCGGATGTCGGTGACATTGTCAAGATTTTGAAGGGCGAGATGGATCTTCCACCATTGCCATTCGAGTTTTCACCATCTCCTCCTTCCAAGTTTTACAGCAAATCAAGGACAAAACACAAGAGCACTACAGAATAG 2319 0.4097 MRISNKEIEERPKLPQVLTLPFSSSSVNVINIHKSFKLERTQKLSSHFTVTLITMPSRSFPSSPNPPSPSFFIKTRVIFLALTISASVVILCSIIYFLYHLWYSIVHRAKTIPFDASAPLKLERFSYKELKQATNGFDAANVIGKGGSGTVFKGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSAFIVTLLGYCVEKNKRVLVYDYMPNKSLQESLFGDDGCLSLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEFRGKISDFGLSRIKVENEFGVDLFSQDLGRSQELWKSQELSGNLTTETPTPAIGTPVESVNEVDFALALQASSSSKNSKTCFNVKTLNLSSFNYNANIAHESEIRTCNAKGKEISTLDIGGDDWNQKFVPYDDEFSSIDHSKELSTVNASSVDEEKINGKQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWVEEKKNINEKAELKLQVQQIIKQMKQMDLNYKHLEXKIQIMWLXEERSKGKEESKEKPRKMQEWWKEEHLAELSKKSSKLKNLQTKLQKGFKVPHFDLGRRFYLCRRRNFAEEAQDESDQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHNGNILELVDERLRDYNKEQASLCINLALACLQKIPELRPDVGDIVKILKGEMDLPPLPFEFSPSPPSKFYSKSRTKHKSTTE 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1150 773 SMART serkin_6 137 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1150 773 ProSiteProfiles Protein kinase domain profile. 137 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1150 773 Coils Coil 480 505 - -
Prci13g1150 773 Coils Coil 536 556 - -
Prci13g1150 773 FunFam Receptor-like serine/threonine-protein kinase At4g25390 106 212 - -
Prci13g1150 773 PANTHER OS07G0586332 PROTEIN 55 768 IPR044576 -
Prci13g1150 773 SUPERFAMILY Protein kinase-like (PK-like) 118 760 IPR011009 -
Prci13g1150 773 FunFam Receptor-like serine/threonine-protein kinase At4g25390 597 745 - -
Prci13g1150 773 Pfam Protein kinase domain 140 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1150 773 FunFam putative receptor-like protein kinase At1g80870 213 325 - -
Prci13g1150 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Prci13g1150 773 Coils Coil 507 507 - -
Prci13g1150 773 Gene3D Transferase(Phosphotransferase) domain 1 213 329 - -
Prci13g1150 773 Gene3D Transferase(Phosphotransferase) domain 1 597 745 - -
Prci13g1150 773 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Prci13g1150 773 MobiDBLite consensus disorder prediction 749 773 - -
Prci13g1150 773 Gene3D Phosphorylase Kinase; domain 1 113 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1150 Prci-Chr13 9845465 9848054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1150 608 739 Receptor kinase-like Gene Family AT3G58690 31.343 8.55e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Prci13g1150 Pkinase 4.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1150 - - gmx:100807432 1083.55