Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1143 ATGTCTCTGAAGATAGCGGCTGAAAGTTGGCCAAAAACGCCATCAGAGACGGCAGAGGATAACAAGTCAGTGGTGGTGAAAGAGTATGATGAAGAGAGACACAAAGTGGCAATAGAGAAAATGGAGAGCCTTTGTGAAGTTGGGCAGAGAGGAAAAACATCTCTTATCACAGACCTCATGGGAGATCCAATATGCCGTATTCGTCACTTCCCAATACACATCATGCTGCAGGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGAGTGATACGAGGATGCGTGAAAACAGTTGCAAGATTGAGTTCAGTTTATGTAAAGGTGGCTTATCTTCTAGGGCTCAGGGTCTGCCCAACAAGAAGGCGACTTGGCATTGGCACAAAACTAGTTGAACACTTGGAAGAATGGTGCAAACAGAAAGGAGCCAAGTATGCATATATAGCAACAGACTGTACAAATGAGGCATCCATCAATTTGTTCACAAAAAAATGCGGCTACTCAAAGTTCAGAACTCTAACCATGTTGGTTCAACCTGTTCATGCTCACTACAAGCCGGTGAGCTCAAGCATTGCCGTGGTTCGCCTCCCGCCGTGGCTAGCCAGGTCCATGTACAACAAGTTGCTTGCCAATTCAGAATTTCACCCTCAAGACATTGGCTTGATCTTGTCTAACAAGCTCAATTTAGGGACCTTCATGAGCATCCCCAAGAGATACCTCTCAAAGTGGGACCCAAAAACAGGCATTATTCCTCCAAATTTTGCCATGTTAAGTGTGTGGAACACCAAGGAAGTGTTCAAACTACAAGTTAAGGGAATTTCACCACTAGCTCAAGCCTTGTGTGCTGGAACAAGGTTATTAGATTCATGCGTGCCATGTTTGAAGCTACCTTCATTTCCTGATGTGTTTAAGCCATTTGGGGTTTATTTCTTGTATGGATTACACATGGAAGGCAAGAATGGCAGGTTTCTGATGAGGTCTTTGTGTGAGTTTGTGCATAATATGGCTAGGGATGATGCTGGTTGTGAGGCTGTTGTGGCTGAACTGGGTCAATGGGACCCAGTTAGAGAGGCGGTCCCACATTGGAACAAGTTCTCGTGGGCTGAGGATATGTGGTGTATCAAGAAACTGGAGAAATATGGGCCGTTTGATTGGATCACATCTAGATCTTCTTCTACACCAGTAATTTTTGTTGACCCTCGTGACTTTTGA 1209 0.4458 MSLKIAAESWPKTPSETAEDNKSVVVKEYDEERHKVAIEKMESLCEVGQRGKTSLITDLMGDPICRIRHFPIHIMLQVAEYGEEGEVVGVIRGCVKTVARLSSVYVKVAYLLGLRVCPTRRRLGIGTKLVEHLEEWCKQKGAKYAYIATDCTNEASINLFTKKCGYSKFRTLTMLVQPVHAHYKPVSSSIAVVRLPPWLARSMYNKLLANSEFHPQDIGLILSNKLNLGTFMSIPKRYLSKWDPKTGIIPPNFAMLSVWNTKEVFKLQVKGISPLAQALCAGTRLLDSCVPCLKLPSFPDVFKPFGVYFLYGLHMEGKNGRFLMRSLCEFVHNMARDDAGCEAVVAELGQWDPVREAVPHWNKFSWAEDMWCIKKLEKYGPFDWITSRSSSTPVIFVDPRDF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1143 402 FunFam Putative N-acetyltransferase HLS1 39 171 - -
Prci13g1143 402 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 180 IPR000182 GO:0016747
Prci13g1143 402 Gene3D - 57 177 - -
Prci13g1143 402 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 402 - -
Prci13g1143 402 CDD NAT_SF 78 147 - -
Prci13g1143 402 Pfam Acetyltransferase (GNAT) family 79 166 IPR000182 GO:0016747
Prci13g1143 402 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 74 173 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1143 Prci-Chr13 9788384 9791007 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci13g1143 Acetyltransf_1 4.5e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1143 - - gmx:100799977 628.632