Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1115 ATGGGTCCTGGTTTTCTTGTTTCTATTGCATATATAGACCCGGGAAACTTTGAAACGGATCTTCAGTCAGGGGCACAATATAAATATGAGTTACTTTGGATTATATTGGTTGCCTCTTGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATTTAGGAGTTGTAACTGGAAAACATTTAGCAGAGCACTGTAGAACTGAATATCCGCGGTCAACAAACTTCATCTTATGGGTTATTGCTGAAATTGCCATAGTGGCTTGCGACATTCCTGAAGTGATAGGAACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTTTAACAGGGCTCAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTGAGGAAACTTGAATTCTTGATTGCATTTCTGGTGTTTACAATTGCTACGTGCTTTTTTGCTGAACTTGGGTATGCAAAACCTGATGCCAAAGAAGTTCTGGAGGGTCTTTTTGTACCAAAGCTCAAAGGGAGTGGTGCTACTGGCCTTGCAATTTCACTCCTCGGGGCTATGGTTATGCCGCACAACCTCTTCCTCCACTCAGCACTGGTGCTTTCTAGAATACCGCGATCAGTTCATGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGCGCCTTTGCTCTTATGGTGGCTTTCCTCATAAATGTTTCTGTCATCTCCGTGAGCGGTGCAGTTTGCAATTCTTCGAATTTGAATGTAGAAGATCAAGAGAACTGTCAGGATTTGGACTTGAACAAAGCCTCCTTTCTGCTAAAAAATGTATTGGGTAAATGGAGTTCAAAACTGTTCGCAATCGCTTTGCTTGCTTCAGGTCAAAGTTCTACTATAACAGGAACATATGCTGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTGAAACCATGGATTCGAAATTTTTTGACTCGTTGTTTAGCCATAGTTCCGAGTTTGATTGTTGCGGATGGTGGCTCTGCTGGGGCAGGGAAACTTATAATTATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTCCTCAAGTTCACTAGCAGCAAAACCAAGATGGGCGCTTATGCCAACTCGTTCACGATTTCAGTTGTGACGTGGATCATCGGTTCGTTCATAATGGCAATAAATATATACTACTTGCTGACAGGGTTCATCAAGTTGCTTCTTCACAGTGACATGGAAATTGTGGGTAAGGTGTTTGTGGGGATGCTAGGGTTTTCAGCCATGGCAGTATATTTGGCTGGGATTGCTTATCTGGTGTTTCGCAAGAACAAGAAGGCAACACACCTTCTGGCACTAACAACACCTGAAAGTAGGCATGGAAATGAACAAGGCAATGGATCAATGTATTGCCTCCCTAGAGAAGACATAGTTAGCATGCAATTGCCTCAGAGAAGTAACTTAGCTGATCTTTGA 1473 0.4209 MGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRTEYPRSTNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIATCFFAELGYAKPDAKEVLEGLFVPKLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKXPRSVHGIKEACRFYMIESAFALMVAFLINVSVISVSGAVCNSSNLNVEDQENCQDLDLNKASFLLKNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNFLTRCLAIVPSLIVAVXGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGAYANSFTISVVTWIIGSFIMAINIYYLLTGFIKLLLHSDMEIVGKVFVGMLGFSAMAVYLAGIAYLVFRKNKKATHLLALTTPESRQXGNEQGNGSMYCLPREDIVSMQLPQRSNLADL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1115 493 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 1 373 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 Hamap Divalent metal cation transporter MntH [mntH]. 1 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 Pfam Natural resistance-associated macrophage protein 17 379 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 NCBIfam Nramp family divalent metal transporter 2 370 - -
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 289 308 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 104 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 317 334 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 129 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 76 102 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 349 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PRINTS Natural resistance-associated macrophage protein signature 179 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1115 493 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1115 Prci-Chr13 9471585 9476986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1115 1 487 Inorganic Solute Cotransporters AT1G15960 80.573 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1115 K21398 - qsa:O6P43_027942 835.099