Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1114 ATGCCCGCCGCCGCCGCCTCTTCAGGTTCCGGCCAAACCATCTGCGTCACCGGAGCCGGTGGCTTCATCGCATCTTGGATCGTCAAACTTCTCTTGGAGAGAGGCTACACTGTTAGAGGCACCGTCAGGAATCCAGATGATTCTAAGAATGCGCACCTGAAAGAGTTGGATGGAGCACAGGAGAGGCTAACTCTTCATAAGGTTGATCTTCTCGATCTTGAGTCCGTGAAAGCTGTCGTTGATGGCTGTCACGGTGTCATTCACACGGCGTCTCCCGTCACAGACAATCCCGAAGAGATGGTGGAGCCAGCAGTGAATGGAACGAAGAATGTGATCATAGCGGCTGCAGAAGCAAATGTGCGAAGAGTAGTGTTCACATCATCCATTGGGGCAGTTTACATGGACCCCAATAGGAGCATTGACATGGTGGTTGATGAGTCTTGCTGGAGCGATTTGGAATATTGCAAGAACACAAAGAACTGGTACTGCTATGGGAAGGCAGTGGCAGAGCAGGCAGCATGGGATGAGGCAAAAGGAAGAGGGGTGGACTTAGTTGTTGTGAACCCAGTTTTGGTGCTGGGACCATTGCTCCAATCCACCATAAATGCTAGCACAATTCACATACTCAAGTATCTCACTGGCTCAGCTAAAACCTATGCAAATGCCACTCAGGCTTATGTTGATGTTAAGGATGTGGCATTAGCCCATATTCTGGTTTTTGAGACCCCTTCTGCTTCTGGTCGTTTTTTATGTTCTGAGAGTTCACTCCACCGTGGAGAACTGGTTGAGATCCTGGCCAAGTACTTCCCAGACTACCCAATTCCTACCAAATGTTCAGACGAGAAGAATCCAAGAGCAAAACCCTACATATTCTCTAACAAGAAATTGAAGGATTTAGGGTTGGAGTTTACCCCAGTGCATCAGTGCTTATACGACACTGTCAAGAGCCTGCAGGACAAGGGCCATCTTTCTCCCCCCGACAAGCAAGCAGAATCTGCTCAGATTAAATCCTAA 1014 0.4872 MPAAAASSGSGQTICVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLKELDGAQERLTLHKVDLLDLESVKAVVDGCHGVIHTASPVTDNPEEMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRSIDMVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDEAKGRGVDLVVVNPVLVLGPLLQSTINASTIHILKYLTGSAKTYANATQAYVDVKDVALAHILVFETPSASGRFLCSESSLHRGELVEILAKYFPDYPIPTKCSDEKNPRAKPYIFSNKKLKDLGLEFTPVHQCLYDTVKSLQDKGHLSPPDKQAESAQIKS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1114 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
Prci13g1114 337 CDD FR_SDR_e 15 301 - -
Prci13g1114 337 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Prci13g1114 337 Gene3D - 3 336 - -
Prci13g1114 337 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Prci13g1114 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1114 Prci-Chr13 9465552 9468691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1114 11 277 Monolignol Biosynthesis Gene Families AT1G80820 74.532 4.44e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1114 K09753 - gmx:100789070 569.311