Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1111 ATGGGCAATGAGGAAACTCCAGTAGTCCCTTCAACAACAGCAACTCAAAGGACTTCTGGTGCTTCACTTTTTGGAGGGAATGGAATAGGCAAGAAATCACTTCTCAAGAGCAAGTGTTTCAGTCCTGAAGAATGGACCTTAGAAGATGGAGGCTTACTCAAAGTCTCTTGCTCATTGCCTCCCTCTCCTGTCCCTCTTGGAAGAAAGGTAGGAGCTGAGTTTGTAGGTACCTTAATTCTCATGTTTGCTGGTATGTCCACTGCTATTGTGAACCAACGGACACCAGGTTCTGAGACTCTAATTGGATGTGCTGCCTCTACTGGTCTTGCTGCCATGGTTGTCATCCTCGCCACCGGTCACATCTCTGGTGCTCATCTCAACCCTGCAGTCACTATTTCCTTTGCTGCTTTAAAGCACTTCCCATGGAAACATGTGCCATTGTATATTGGTGCACAGCTTACAGCGTCCATCTGTGCAGCATTTGCATTGAAGGGGATATTTCACCCCTTCATGAGTGGAGGAGTCACAGTTCCTTCAGGCGGATATGCTCAAGCTTTTGCTTTAGAGTTTATTATCAGCTTTATTCTCATGTTTGTTGTCACAGCAGTGGCCACTGACACAAGAGCTGTGGGGGAACTTGCCGGAATTGCAGTTGGAGCAACTGTCATGCTCAACATACTTATAGCCGGGCCATCAACAGGAGGATCAATGAACCCAGTGAGAACACTTGGTCCAGCTATTGCTGCAAGAAACTACAAAGACATATGGGTCTACCTCTTTGCTCCTATACTCGGAGCTCTTGGTGGGGCAGGAATCTACACTGCAGTCAAGCTTCCAGAAGATAGTGAACAAGGAGAGGCTTCAATGCCCTGA 873 0.4719 MGNEETPVVPSTTATQRTSGASLFGGNGIGKKSLLKSKCFSPEEWTLEDGGLLKVSCSLPPSPVPLGRKVGAEFVGTLILMFAGMSTAIVNQRTPGSETLIGCAASTGLAAMVVILATGHISGAHLNPAVTISFAALKHFPWKHVPLYIGAQLTASICAAFALKGIFHPFMSGGVTVPSGGYAQAFALEFIISFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAIAARNYKDIWVYLFAPILGALGGAGIYTAVKLPEDSEQGEASMP 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1111 290 CDD MIP 68 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 MobiDBLite consensus disorder prediction 1 20 - -
Prci13g1111 290 Pfam Major intrinsic protein 67 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 SUPERFAMILY Aquaporin-like 65 280 IPR023271 -
Prci13g1111 290 ProSitePatterns MIP family signature. 125 133 IPR022357 -
Prci13g1111 290 Gene3D Glycerol uptake facilitator protein. 62 287 IPR023271 -
Prci13g1111 290 PANTHER AQUAPORIN NIP2-1 48 280 IPR034294 -
Prci13g1111 290 FunFam Aquaporin NIP2-1 56 288 - -
Prci13g1111 290 PRINTS Major intrinsic protein family signature 144 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 PRINTS Major intrinsic protein family signature 107 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 PRINTS Major intrinsic protein family signature 188 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci13g1111 290 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1111 Prci-Chr13 9389151 9393069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1111 1 283 Major Intrinsic Protein MIP AT1G80760 74.915 3.65e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1111 K09874 - cave:132187749 426.787